RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 ARL2BPQ9Y2Y0 163 aa10.86□□□□□ -0.67
APTX-213ENST00000465003 RP1L1Q8IWN7 2480 aaPredicted RBP10.86□□□□□ -0.67
APTX-213ENST00000465003 TRBV5-3A0A0A0MS03 114 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 FXYD1O00168 92 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 AIM2O14862 343 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 CCDC22O60826 627 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 H6PDO95479 791 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 COX4I1P13073 169 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 PPIAP62937 165 aaKnown RBP10.85□□□□□ -0.67
APTX-213ENST00000465003 FOXK1P85037 733 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 ALDH6A1Q02252 535 aaKnown RBP10.85□□□□□ -0.67
APTX-213ENST00000465003 RGNQ15493 299 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 MAPK11Q15759 364 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 FLYWCH1Q4VC44 716 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 ZNF605Q86T29 641 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 TMEM251Q8N6I4 163 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 WDSUB1Q8N9V3 476 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 ZFP62Q8NB50 900 aaPredicted RBP10.85□□□□□ -0.67
APTX-213ENST00000465003 POGLUT1Q8NBL1 392 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 FAM98AQ8NCA5 519 aaKnown RBP10.85□□□□□ -0.67
APTX-213ENST00000465003 FAM110BQ8TC76 370 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 NR4A3Q92570 626 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 ROPN1LQ96C74 230 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 SH3YL1Q96HL8 342 aaPredicted RBP10.85□□□□□ -0.67
APTX-213ENST00000465003 CGREF1Q99674 301 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 CNIH4Q9P003 139 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 GMPR2Q9P2T1 348 aaKnown RBP10.85□□□□□ -0.67
APTX-213ENST00000465003 WIF1Q9Y5W5 379 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 DNAJC13O75165 2243 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 FADS1O60427 444 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 BCAS1O75363 584 aaPredicted RBP10.85□□□□□ -0.67
APTX-213ENST00000465003 TRIM3O75382 744 aaPredicted RBP10.85□□□□□ -0.67
APTX-213ENST00000465003 ZCCHC18P0CG32 403 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 NAGAP17050 411 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 ATP6V1C1P21283 382 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 DCTP40126 519 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 DSTNP60981 165 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 CHRNEQ04844 493 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 LRRC74AQ0VAA2 488 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 MAPK14Q16539 360 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 PDZK1Q5T2W1 519 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 RPUSD3Q6P087 351 aaKnown RBP10.85□□□□□ -0.67
APTX-213ENST00000465003 SPPL2CQ8IUH8 684 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 MIPOL1Q8TD10 442 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 BCAS4Q8TDM0 211 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 ZNF597Q96LX8 424 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 CPPED1Q9BRF8 314 aaPredicted RBP10.85□□□□□ -0.67
APTX-213ENST00000465003 ANGPTL4Q9BY76 406 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 TBL1XR1Q9BZK7 514 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 ZNF703Q9H7S9 590 aaPredicted RBP10.85□□□□□ -0.67
APTX-213ENST00000465003 MED11Q9P086 117 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 SH3BGRL2Q9UJC5 107 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 PCDHGB6Q9Y5F9 930 aa10.85□□□□□ -0.67
APTX-213ENST00000465003 H0YHG0 523 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 OIP5O43482 229 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 TNFRSF21O75509 655 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 TRAPPC6AO75865 159 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 KRT75O95678 551 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 ANGPTL1O95841 491 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 GDF1P27539 372 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 AQP1P29972 269 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 TDGF1P3P51864 188 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 GAS1P54826 345 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 PSMD4P55036 377 aaKnown RBP10.84□□□□□ -0.67
APTX-213ENST00000465003 EFR3AQ14156 821 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.84□□□□□ -0.67
APTX-213ENST00000465003 ARHGAP11BQ3KRB8 267 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 CMPK2Q5EBM0 449 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 ATAD3BQ5T9A4 648 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 GKAP1Q5VSY0 366 aaPredicted RBP10.84□□□□□ -0.67
APTX-213ENST00000465003 ZNF324BQ6AW86 544 aaPredicted RBP10.84□□□□□ -0.67
APTX-213ENST00000465003 TYW3Q6IPR3 259 aaKnown RBP10.84□□□□□ -0.67
APTX-213ENST00000465003 HEPHL1Q6MZM0 1159 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 FRRS1Q6ZNA5 592 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 DND1Q8IYX4 353 aaKnown RBP10.84□□□□□ -0.67
APTX-213ENST00000465003 DPP10Q8N608 796 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 FBXO27Q8NI29 283 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 DUSP19Q8WTR2 217 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 THUMPD3Q9BV44 507 aaKnown RBP10.84□□□□□ -0.67
APTX-213ENST00000465003 ZFP64Q9NPA5 681 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 MRTO4Q9UKD2 239 aaKnown RBP10.84□□□□□ -0.67
APTX-213ENST00000465003 WDR45Q9Y484 360 aa10.84□□□□□ -0.67
APTX-213ENST00000465003 DUXAA6NLW8 204 aa10.83□□□□□ -0.68
APTX-213ENST00000465003 SHISA8B8ZZ34 492 aa10.83□□□□□ -0.68
APTX-213ENST00000465003 NDUFAB1O14561 156 aa10.83□□□□□ -0.68
APTX-213ENST00000465003 GLSO94925 669 aaPredicted RBP10.83□□□□□ -0.68
APTX-213ENST00000465003 CBX6O95503 412 aa10.83□□□□□ -0.68
APTX-213ENST00000465003 KRT16P08779 473 aa10.83□□□□□ -0.68
APTX-213ENST00000465003 NR2F1P10589 423 aa10.83□□□□□ -0.68
APTX-213ENST00000465003 HPGDP15428 266 aa10.83□□□□□ -0.68
APTX-213ENST00000465003 NUDT2P50583 147 aa10.83□□□□□ -0.68
APTX-213ENST00000465003 HPCAP84074 193 aa10.83□□□□□ -0.68
APTX-213ENST00000465003 TRMT5Q32P41 509 aaKnown RBP10.83□□□□□ -0.68
APTX-213ENST00000465003 RUNDC3AQ59EK9 446 aa10.83□□□□□ -0.68
APTX-213ENST00000465003 CBLN3Q6UW01 205 aa10.83□□□□□ -0.68
APTX-213ENST00000465003 SIAH3Q8IW03 269 aa10.83□□□□□ -0.68
APTX-213ENST00000465003 FITM2Q8N6M3 262 aa10.83□□□□□ -0.68
APTX-213ENST00000465003 OR5M1Q8NGP8 315 aa10.83□□□□□ -0.68
APTX-213ENST00000465003 OR1J4Q8NGS1 313 aa10.83□□□□□ -0.68
APTX-213ENST00000465003 SLC38A5Q8WUX1 472 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms