RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 OR5D16Q8NGK9 328 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 OR2A12Q8NGT7 310 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 OR2T4Q8NH00 348 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 CEP76Q8TAP6 659 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 TRMT10AQ8TBZ6 339 aaKnown RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 CXorf40AQ8TE69 158 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 GIMAP1Q8WWP7 306 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 TOE1Q96GM8 510 aaKnown RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 FAM46AQ96IP4 442 aaKnown RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 LCORQ96JN0 433 aaPredicted RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 AMDHD1Q96NU7 426 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 ZCCHC2Q9C0B9 1178 aaKnown RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 PITHD1Q9GZP4 211 aaPredicted RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 KCNK12Q9HB15 430 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 SEMA4GQ9NTN9 838 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 ZCCHC3Q9NUD5 404 aaKnown RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 CNIH4Q9P003 139 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 H2AFY2Q9P0M6 372 aaPredicted RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 TRPC4Q9UBN4 977 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 POMT2Q9UKY4 750 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 NPFFR2Q9Y5X5 522 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 SIRT4Q9Y6E7 314 aaPredicted RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 CSNK1G3Q9Y6M4 447 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 CCDC88CQ9P219 2028 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 LOC105369274A0A096LPK9 316 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 ANKRD61A6NGH8 418 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 SLC9B1P1A6NJY1 282 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 LRRN3E7EW58 273 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 RTCAO00442 366 aaKnown RBP6.82□□□□□ -1.32
USP48-206ENST00000464577 TMPRSS11DO60235 418 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 ALPPL2P10696 532 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 ATF4P18848 351 aaPredicted RBP6.82□□□□□ -1.32
USP48-206ENST00000464577 ACADLP28330 430 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 SHC1P29353 583 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 LCN1P31025 176 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 SRP9P49458 86 aaKnown RBP6.82□□□□□ -1.32
USP48-206ENST00000464577 ZP1P60852 638 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 REEP5Q00765 189 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 KLF9Q13886 244 aaPredicted RBP6.82□□□□□ -1.32
USP48-206ENST00000464577 ZNF697Q5TEC3 545 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 NIPAL3Q6P499 406 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 WASH2PQ6VEQ5 465 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 CXXC5Q7LFL8 322 aaKnown RBP6.82□□□□□ -1.32
USP48-206ENST00000464577 RRM2BQ7LG56 351 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 ADCK2Q7Z695 626 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 PXKQ7Z7A4 578 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 MEX3DQ86XN8 651 aaKnown RBP6.82□□□□□ -1.32
USP48-206ENST00000464577 SLITRK4Q8IW52 837 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 CFAP206Q8IYR0 622 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 CMTM8Q8IZV2 173 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 OR4N4Q8N0Y3 316 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 MS4A15Q8N5U1 240 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 OR2T33Q8NG76 320 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 OR6C4Q8NGE1 309 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 RPLP0P6Q8NHW5 317 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 ACOT11Q8WXI4 607 aaPredicted RBP6.82□□□□□ -1.32
USP48-206ENST00000464577 MOAP1Q96BY2 351 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 LINC00615Q96LM1 132 aaPredicted RBP6.82□□□□□ -1.32
USP48-206ENST00000464577 FCRL4Q96PJ5 515 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 F2RL3Q96RI0 385 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 TIMP4Q99727 224 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 AIF1LQ9BQI0 150 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 ALG8Q9BVK2 526 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 FAIM2Q9BWQ8 316 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 ZNF436Q9C0F3 470 aaPredicted RBP6.82□□□□□ -1.32
USP48-206ENST00000464577 LRRN3Q9H3W5 708 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 FN3KQ9H479 309 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 DPEP2Q9H4A9 486 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 GLIPR2Q9H4G4 154 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 LHX9Q9NQ69 397 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 WASH6PQ9NQA3 447 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 HINT3Q9NQE9 182 aaKnown RBP6.82□□□□□ -1.32
USP48-206ENST00000464577 MRPL17Q9NRX2 175 aaKnown RBP6.82□□□□□ -1.32
USP48-206ENST00000464577 TDP1Q9NUW8 608 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 SPG21Q9NZD8 308 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 KCMF1Q9P0J7 381 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 ABRACLQ9P1F3 81 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 TMEM5Q9Y2B1 443 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 INSL5Q9Y5Q6 135 aa6.82□□□□□ -1.32
USP48-206ENST00000464577 COL4A3Q01955 1670 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 C17orf113A0A1B0GUU1 675 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 MFSD2BA6NFX1 497 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 GLTPD2A6NH11 291 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 SOCS6O14544 535 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 NDUFS4O43181 175 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 PLPP2O43688 288 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 SSNA1O43805 119 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 PPM1BO75688 479 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 SC5DO75845 299 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 OR5F1O95221 314 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 TGM6O95932 706 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 CFDP00746 253 aaPredicted RBP6.81□□□□□ -1.32
USP48-206ENST00000464577 MT-ND5P03915 603 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 CKMP06732 381 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 ACSM4P0C7M7 580 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 SAGP10523 405 aaPredicted RBP6.81□□□□□ -1.32
USP48-206ENST00000464577 ERGP11308 486 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 SELPP16109 830 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 NDUFV2P19404 249 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 KELP23276 732 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms