RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 HPCAL1P37235 193 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 MMP12P39900 470 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 CASP4P49662 377 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 CDH4P55283 916 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 SNRPD1P62314 119 aaKnown RBP4.83□□□□□ -1.64
COPS3-205ENST00000463097 ZNF85Q03923 595 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 COX10Q12887 443 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 ZNF177Q13360 481 aaPredicted RBP4.83□□□□□ -1.64
COPS3-205ENST00000463097 ZRSR1Q15695 479 aaKnown RBP4.83□□□□□ -1.64
COPS3-205ENST00000463097 LCLAT1Q6UWP7 414 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 ADAMTSL5Q6ZMM2 481 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 CCDC80Q76M96 950 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 HSD11B1LQ7Z5J1 315 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 KCNMB4Q86W47 210 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 ZNF781Q8N8C0 355 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 ZNRF1Q8ND25 227 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 OR52B6Q8NGF0 335 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 OR1F12Q8NHA8 337 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 CNIH3Q8TBE1 160 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 MRGPRDQ8TDS7 321 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 RBM14Q96PK6 669 aaKnown RBP4.83□□□□□ -1.64
COPS3-205ENST00000463097 FAM173AQ9BQD7 235 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 CABLES2Q9BTV7 478 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 CHRDL1Q9BU40 450 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 ST6GALNAC5Q9BVH7 336 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 DGCR6LQ9BY27 220 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 KRTAP9-3Q9BYQ3 159 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 CRLF2Q9HC73 371 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 ESM1Q9NQ30 184 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 CHMP5Q9NZZ3 219 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 THYN1Q9P016 225 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 GALPQ9UBC7 116 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 CIDEBQ9UHD4 219 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 ADAM28Q9UKQ2 775 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 NPIPA1Q9UND3 350 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 IFT52Q9Y366 437 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 MAD1L1Q9Y6D9 718 aa4.83□□□□□ -1.64
COPS3-205ENST00000463097 PCF11O94913 1555 aaKnown RBP4.82□□□□□ -1.64
COPS3-205ENST00000463097 CFTRP13569 1480 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 TTC41PQ6P2S7 1318 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 A0A075B6Q4 140 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 H0YIV9 168 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 BMPR1BO00238 502 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 DYNC1I1O14576 645 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 DNALI1O14645 258 aaPredicted RBP4.82□□□□□ -1.64
COPS3-205ENST00000463097 NBR2O15453 112 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 INSIG1O15503 277 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 LMX1BO60663 402 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 WBP4O75554 376 aaKnown RBP4.82□□□□□ -1.64
COPS3-205ENST00000463097 SORBS2O94875 1100 aaKnown RBP4.82□□□□□ -1.64
COPS3-205ENST00000463097 NTN1O95631 604 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 CLDN1O95832 211 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 FGF4P08620 206 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 PRKACGP22612 351 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 CCKARP32238 428 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 BDKRB1P46663 353 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 AP3M2P53677 418 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 RPS8P62241 208 aaKnown RBP4.82□□□□□ -1.64
COPS3-205ENST00000463097 CYCSP99999 105 aaKnown RBP4.82□□□□□ -1.64
COPS3-205ENST00000463097 RGS1Q08116 209 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 CCDC173Q0VFZ6 552 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 UPP1Q16831 310 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 MTHFSDQ2M296 383 aaKnown RBP4.82□□□□□ -1.64
COPS3-205ENST00000463097 TMEM44Q2T9K0 475 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 SNAI3Q3KNW1 292 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 ZNF718Q3SXZ3 478 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 BCL7AQ4VC05 210 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 CTSL3PQ5NE16 218 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 C1orf185Q5T7R7 199 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 WLSQ5T9L3 541 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 ATL3Q6DD88 541 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 OR4F3Q6IEY1 312 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 PWWP2BQ6NUJ5 590 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 STOX1Q6ZVD7 989 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 CCDC71Q8IV32 467 aaPredicted RBP4.82□□□□□ -1.64
COPS3-205ENST00000463097 SAMD12Q8N8I0 201 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 OR6C4Q8NGE1 309 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 M1APQ8TC57 530 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 SCFD1Q8WVM8 642 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 DNAJA3Q96EY1 480 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 GMPPAQ96IJ6 420 aaPredicted RBP4.82□□□□□ -1.64
COPS3-205ENST00000463097 C12orf66Q96MD2 445 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 EPYCQ99645 322 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 SLC6A7Q99884 636 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 ZNF556Q9HAH1 456 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 MCCC2Q9HCC0 563 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 ZFP14Q9HCL3 533 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 SPHK2Q9NRA0 654 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 DEPPQ9NTK1 212 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 EXOGQ9Y2C4 368 aaKnown RBP4.82□□□□□ -1.64
COPS3-205ENST00000463097 MEMO1Q9Y316 297 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 GMPPBQ9Y5P6 360 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 EHBP1L1Q8N3D4 1523 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 UGGT2Q9NYU1 1516 aa4.82□□□□□ -1.64
COPS3-205ENST00000463097 ARHGAP31Q2M1Z3 1444 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 MTUS2Q5JR59 1369 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 IGHV3-38A0A0C4DH36 116 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 SERTM2A0A1B0GWG4 89 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 HHLA1C9JL84 531 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 LRRTM2O43300 516 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms