RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 ANKRD26P1Q6NSI1 321 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 PPP4R4Q6NUP7 873 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 NOXRED1Q6NXP6 359 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 ZYG11AQ6WRX3 759 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 FRMD7Q6ZUT3 714 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 IKBIPQ70UQ0 350 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 FAM214BQ7L5A3 538 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 ZNF551Q7Z340 670 aaPredicted RBP14.46□□□□□ -0.09
COL7A1-204ENST00000462475 TRIM46Q7Z4K8 759 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 GALNT10Q86SR1 603 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 FAM76AQ8TAV0 307 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 PIK3R3Q92569 461 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 GFM2Q969S9 779 aaKnown RBP14.46□□□□□ -0.09
COL7A1-204ENST00000462475 PERPQ96FX8 193 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 EGLN2Q96KS0 407 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 TBK1Q9UHD2 729 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 MRTO4Q9UKD2 239 aaKnown RBP14.46□□□□□ -0.09
COL7A1-204ENST00000462475 AP4B1Q9Y6B7 739 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 ZANQ9Y493 2812 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 EIF1AYO14602 144 aaKnown RBP14.45□□□□□ -0.1
COL7A1-204ENST00000462475 CRCPO75575 148 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 MYL2P10916 166 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 FCGR2AP12318 317 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 FPR1P21462 350 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 EIF1AXP47813 144 aaKnown RBP14.45□□□□□ -0.1
COL7A1-204ENST00000462475 PRR5P85299 388 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 C17orf67Q0P5P2 114 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 HSPB3Q12988 150 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 FGFBP1Q14512 234 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 SLC29A2Q14542 456 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 SGCBQ16585 318 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 EXOC3L2Q2M3D2 409 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 GLYR1Q49A26 553 aaPredicted RBP14.45□□□□□ -0.1
COL7A1-204ENST00000462475 YTHDF3Q7Z739 585 aaKnown RBP14.45□□□□□ -0.1
COL7A1-204ENST00000462475 EXOC3L1Q86VI1 746 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 PPP1R14CQ8TAE6 165 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 FBXO30Q8TB52 745 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 CIDECQ96AQ7 238 aaPredicted RBP14.45□□□□□ -0.1
COL7A1-204ENST00000462475 CCDC126Q96EE4 140 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 NPAS1Q99742 590 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 KLHL4Q9C0H6 718 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 CLEC4AQ9UMR7 237 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 VDAC3Q9Y277 283 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 WBP11Q9Y2W2 641 aaKnown RBP14.45□□□□□ -0.1
COL7A1-204ENST00000462475 CCL27Q9Y4X3 112 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 PTGDR2Q9Y5Y4 395 aa14.45□□□□□ -0.1
COL7A1-204ENST00000462475 A0A1W2PPM1 405 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 TRIM64A6NGJ6 449 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 TRIM64BA6NI03 449 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 PDPK1O15530 556 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 GLRA3O75311 464 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 KCNH1O95259 989 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 PROCP04070 461 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 THBDP07204 575 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 IFI6P09912 130 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 FAM153BP0C7A2 387 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 TBXA2RP21731 343 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 OCRLQ01968 901 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 KIAA0040Q15053 153 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 FAM153CQ494X1 144 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 ZNF385BQ569K4 471 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 C20orf204Q6ZNR8 217 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 GATSQ8NAP1 163 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 GPR151Q8TDV0 419 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 SLC9A6Q92581 669 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 HOXB13Q92826 284 aaPredicted RBP14.44□□□□□ -0.1
COL7A1-204ENST00000462475 CAVIN3Q969G5 261 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 TXLNGYQ9BZA5 131 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 C3orf14Q9HBI5 128 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 RRAGDQ9NQL2 400 aaPredicted RBP14.44□□□□□ -0.1
COL7A1-204ENST00000462475 DCDC2Q9UHG0 476 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 ARID1AO14497 2285 aa14.44□□□□□ -0.1
COL7A1-204ENST00000462475 JMJD1CQ15652 2540 aa14.43□□□□□ -0.1
COL7A1-204ENST00000462475 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.43□□□□□ -0.1
COL7A1-204ENST00000462475 FAM171A2A8MVW0 826 aa14.43□□□□□ -0.1
COL7A1-204ENST00000462475 ALG1L2C9J202 215 aa14.43□□□□□ -0.1
COL7A1-204ENST00000462475 SMAD7O15105 426 aaKnown RBP14.43□□□□□ -0.1
COL7A1-204ENST00000462475 NKX2-2O95096 273 aa14.43□□□□□ -0.1
COL7A1-204ENST00000462475 OXSR1O95747 527 aaPredicted RBP14.43□□□□□ -0.1
COL7A1-204ENST00000462475 PRPS2P11908 318 aa14.43□□□□□ -0.1
COL7A1-204ENST00000462475 ZNF17P17021 662 aa14.43□□□□□ -0.1
COL7A1-204ENST00000462475 MAP3K8P41279 467 aa14.43□□□□□ -0.1
COL7A1-204ENST00000462475 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.43□□□□□ -0.1
COL7A1-204ENST00000462475 CTU2Q2VPK5 515 aaKnown RBP14.43□□□□□ -0.1
COL7A1-204ENST00000462475 CLEC6AQ6EIG7 209 aa14.43□□□□□ -0.1
COL7A1-204ENST00000462475 PRSS57Q6UWY2 283 aa14.43□□□□□ -0.1
COL7A1-204ENST00000462475 SH2D5Q6ZV89 423 aa14.43□□□□□ -0.1
COL7A1-204ENST00000462475 ZAR1Q86SH2 424 aa14.43□□□□□ -0.1
COL7A1-204ENST00000462475 OR6K3Q8NGY3 331 aa14.43□□□□□ -0.1
COL7A1-204ENST00000462475 OR4C3Q8NH37 302 aa14.43□□□□□ -0.1
COL7A1-204ENST00000462475 OR10D3Q8NH80 312 aa14.43□□□□□ -0.1
COL7A1-204ENST00000462475 ADGRG7Q96K78 797 aa14.43□□□□□ -0.1
COL7A1-204ENST00000462475 KLHDC3Q9BQ90 382 aa14.43□□□□□ -0.1
COL7A1-204ENST00000462475 PRRG4Q9BZD6 226 aa14.43□□□□□ -0.1
COL7A1-204ENST00000462475 C12orf65Q9H3J6 166 aaKnown RBP14.43□□□□□ -0.1
COL7A1-204ENST00000462475 EMC9Q9Y3B6 208 aa14.43□□□□□ -0.1
COL7A1-204ENST00000462475 TLN2Q9Y4G6 2542 aa14.43□□□□□ -0.1
COL7A1-204ENST00000462475 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.42□□□□□ -0.1
COL7A1-204ENST00000462475 TTC36A6NLP5 189 aa14.42□□□□□ -0.1
COL7A1-204ENST00000462475 H3BQF6 201 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms