RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 VASNQ6EMK4 673 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 MFSD12Q6NUT3 480 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 CDC73Q6P1J9 531 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 FIGNL1Q6PIW4 674 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 NPSR1Q6W5P4 371 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 MTERF4Q7Z6M4 381 aaKnown RBP8.15□□□□□ -1.1
DDX39B-216ENST00000462421 GTF2IRD2Q86UP8 949 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 OR4N2Q8NGD1 307 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 PHOSPHO1Q8TCT1 267 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 ZPLD1Q8TCW7 415 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 DUSP19Q8WTR2 217 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 PIK3R3Q92569 461 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 ZBTB8AQ96BR9 441 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 ZBTB9Q96C00 473 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 FAM120BQ96EK7 910 aaKnown RBP8.15□□□□□ -1.1
DDX39B-216ENST00000462421 SPOCK3Q9BQ16 436 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 PRDM14Q9GZV8 571 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 PIGMQ9H3S5 423 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 AKTIPQ9H8T0 292 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 TNFRSF12AQ9NP84 129 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 DUSP22Q9NRW4 184 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 PAQR5Q9NXK6 330 aaPredicted RBP8.15□□□□□ -1.1
DDX39B-216ENST00000462421 GIN1Q9NXP7 522 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 ASIC5Q9NY37 505 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 ZNF629Q9UEG4 869 aaPredicted RBP8.15□□□□□ -1.1
DDX39B-216ENST00000462421 MARCOQ9UEW3 520 aaPredicted RBP8.15□□□□□ -1.1
DDX39B-216ENST00000462421 MCTS1Q9ULC4 181 aaKnown RBP8.15□□□□□ -1.1
DDX39B-216ENST00000462421 MRPS18CQ9Y3D5 142 aaKnown RBP8.15□□□□□ -1.1
DDX39B-216ENST00000462421 PRRC2CQ9Y520 2896 aaKnown RBP8.14□□□□□ -1.11
DDX39B-216ENST00000462421 NKX2-6A6NCS4 301 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 CD8B2A6NJW9 211 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 SLC22A20A6NK97 555 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 RNASET2O00584 256 aaKnown RBP8.14□□□□□ -1.11
DDX39B-216ENST00000462421 CASKO14936 926 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 CYP7B1O75881 506 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 NKX2-2O95096 273 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 HMGN2P05204 90 aaKnown RBP8.14□□□□□ -1.11
DDX39B-216ENST00000462421 VIMP08670 466 aaKnown RBP8.14□□□□□ -1.11
DDX39B-216ENST00000462421 PABPC4LP0CB38 370 aaKnown RBP8.14□□□□□ -1.11
DDX39B-216ENST00000462421 EFNA1P20827 205 aaPredicted RBP8.14□□□□□ -1.11
DDX39B-216ENST00000462421 TBXA2RP21731 343 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 CTSSP25774 331 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 TIMP3P35625 211 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 EIF1P41567 113 aaKnown RBP8.14□□□□□ -1.11
DDX39B-216ENST00000462421 CTBP2P56545 445 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.14□□□□□ -1.115e-10■■■■■ 34.6
DDX39B-216ENST00000462421 GRAMD1BQ3KR37 738 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 UGT3A2Q3SY77 523 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 GLYR1Q49A26 553 aaPredicted RBP8.14□□□□□ -1.11
DDX39B-216ENST00000462421 HSP90B2PQ58FF3 399 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 DCST2Q5T1A1 773 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 NCCRP1Q6ZVX7 275 aaPredicted RBP8.14□□□□□ -1.11
DDX39B-216ENST00000462421 FGD2Q7Z6J4 655 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 MARCH3Q86UD3 253 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 KRTCAP2Q8N6L1 136 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 GLB1L3Q8NCI6 653 aaPredicted RBP8.14□□□□□ -1.11
DDX39B-216ENST00000462421 TOR1AIP2Q8NFQ8 470 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 OR5AK3PQ8NH89 298 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 B4GALNT2Q8NHY0 566 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 CDS1Q92903 461 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 PANX1Q96RD7 426 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 SFXN3Q9BWM7 321 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 UBQLN3Q9H347 655 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 PIGUQ9H490 435 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 ARMC7Q9H6L4 198 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 MEAF6Q9HAF1 191 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 PROK2Q9HC23 129 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 TMBIM4Q9HC24 238 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 MED11Q9P086 117 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 GIMAP2Q9UG22 337 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 FBXL2Q9UKC9 423 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 VDAC3Q9Y277 283 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 SPIN1Q9Y657 262 aaPredicted RBP8.14□□□□□ -1.11
DDX39B-216ENST00000462421 AP4B1Q9Y6B7 739 aa8.14□□□□□ -1.11
DDX39B-216ENST00000462421 DOPEY2Q9Y3R5 2298 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 A0A0G2JNJ9 132 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 GOLGA8QA0A0J9YX86 632 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 PRSS51A0A1B0GVH4 220 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 GXYLT2A0PJZ3 443 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 GOLGA8OA6NCC3 632 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 HMGB1P1B2RPK0 211 aaPredicted RBP8.13□□□□□ -1.11
DDX39B-216ENST00000462421 GOLGA8NF8WBI6 632 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 UBDO15205 165 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 ITM2AO43736 263 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 DIAPH2O60879 1101 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 STX11O75558 287 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 KCNK2O95069 426 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 KRT75O95678 551 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 OXSR1O95747 527 aaPredicted RBP8.13□□□□□ -1.11
DDX39B-216ENST00000462421 IL6P05231 212 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 NGFRP08138 427 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 CPN1P15169 458 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 ZNF17P17021 662 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 CAPN3P20807 821 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 UQCRC2P22695 453 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 SLC7A1P30825 629 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 CPOXP36551 454 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 FRKP42685 505 aaPredicted RBP8.13□□□□□ -1.11
DDX39B-216ENST00000462421 KIR2DL3P43628 341 aa8.13□□□□□ -1.11
DDX39B-216ENST00000462421 SUMO3P55854 103 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms