RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SNUPNO95149 360 aaKnown RBP9.21□□□□□ -0.94
SF3A3-204ENST00000462258 OXSR1O95747 527 aaPredicted RBP9.21□□□□□ -0.94
SF3A3-204ENST00000462258 ANGPTL1O95841 491 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 C6orf47O95873 294 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 HMGN2P05204 90 aaKnown RBP9.21□□□□□ -0.94
SF3A3-204ENST00000462258 ALOX5P09917 674 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 TMIGD3P0DMS9 266 aaPredicted RBP9.21□□□□□ -0.94
SF3A3-204ENST00000462258 HK1P19367 917 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 PRPS1L1P21108 318 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 BGNP21810 368 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 CHMP24386 653 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 UQCRC1P31930 480 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 OPRM1P35372 400 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 SOAT1P35610 550 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 STARP49675 285 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 DLX5P56178 289 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 B3GALT5-AS1P59052 145 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 TP53BP2Q13625 1128 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.21□□□□□ -0.94
SF3A3-204ENST00000462258 ZCCHC12Q6PEW1 402 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 FIGNL1Q6PIW4 674 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 POMZP3Q6PJE2 187 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 ADGRE4PQ86SQ3 457 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 CDH24Q86UP0 819 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 TMEM200AQ86VY9 491 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 NATD1Q8N6N6 113 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 SLC16A11Q8NCK7 471 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 OR56A1Q8NGH5 318 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 OR5P2Q8WZ92 322 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 C1GALT1C1Q96EU7 318 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 CHMP6Q96FZ7 201 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 PGM2Q96G03 612 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 C16orf58Q96GQ5 468 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 PPP1R36Q96LQ0 422 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 ZFP3Q96NJ6 502 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 SORT1Q99523 831 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 PRPF18Q99633 342 aaKnown RBP9.21□□□□□ -0.94
SF3A3-204ENST00000462258 YIPF4Q9BSR8 244 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 G6PC3Q9BUM1 346 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 BHLHE41Q9C0J9 482 aaPredicted RBP9.21□□□□□ -0.94
SF3A3-204ENST00000462258 CXorf36Q9H7Y0 433 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 ZNF395Q9H8N7 513 aaPredicted RBP9.21□□□□□ -0.94
SF3A3-204ENST00000462258 KCNK9Q9NPC2 374 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 ASIC5Q9NY37 505 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 NOP53Q9NZM5 478 aaKnown RBP9.21□□□□□ -0.94
SF3A3-204ENST00000462258 MED11Q9P086 117 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 RAP2CQ9Y3L5 183 aa9.21□□□□□ -0.94
SF3A3-204ENST00000462258 CCDC168Q8NDH2 2452 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 IGLV3-32A0A0A0MS00 114 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 OR2M5A3KFT3 312 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 ALG1L2C9J202 215 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 H3BML4 177 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 SEC14L5O43304 696 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 HCRTR2O43614 444 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 GMFGO60234 142 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 ZIC3O60481 467 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 KCNK2O95069 426 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 NGFRP08138 427 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 KRT16P08779 473 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 G6PDP11413 515 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 PEPDP12955 493 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 CTSSP25774 331 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 PEX19P40855 299 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 SLC1A6P48664 564 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 AGFG1P52594 562 aaKnown RBP9.2□□□□□ -0.94
SF3A3-204ENST00000462258 DIO3P55073 304 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 C21orf58P58505 322 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 POU6F2P78424 691 aaPredicted RBP9.2□□□□□ -0.94
SF3A3-204ENST00000462258 EMX2Q04743 252 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 C17orf67Q0P5P2 114 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 SNTB1Q13884 538 aaKnown RBP9.2□□□□□ -0.94
SF3A3-204ENST00000462258 MPP2Q14168 576 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 SMU1Q2TAY7 513 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 FBXL19-AS1Q494R0 122 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 SPDYE7PQ495Y7 208 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 EXOSC6Q5RKV6 272 aaKnown RBP9.2□□□□□ -0.94
SF3A3-204ENST00000462258 CCNJQ5T5M9 372 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 ARSKQ6UWY0 536 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 PLXDC2Q6UX71 529 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 APOOLQ6UXV4 268 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 CAMKMTQ7Z624 323 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 ZAR1Q86SH2 424 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 GRAMD2AQ8IUY3 354 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 RIMKLAQ8IXN7 391 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 ZZZ3Q8IYH5 903 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 UBQLNLQ8IYU4 475 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 KIRREL3Q8IZU9 778 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 GCNT2Q8N0V5 402 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 MEIOBQ8N635 442 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 ANKRD42Q8N9B4 389 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 GATSQ8NAP1 163 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 OR5M1Q8NGP8 315 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 PSMA8Q8TAA3 256 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 SFXN5Q8TD22 340 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 DUSP19Q8WTR2 217 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 NUDT8Q8WV74 236 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 CDS1Q92903 461 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 RNASE6Q93091 150 aaKnown RBP9.2□□□□□ -0.94
SF3A3-204ENST00000462258 MOAP1Q96BY2 351 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 UCN2Q96RP3 112 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms