RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 CD3EP07766 207 aa15.43■□□□□ 0.06
TOP3A-202ENST00000461127 GFAPP14136 432 aa15.43■□□□□ 0.06
TOP3A-202ENST00000461127 ATP5F1P24539 256 aaPredicted RBP15.43■□□□□ 0.06
TOP3A-202ENST00000461127 SUCLG1P53597 346 aaKnown RBP15.43■□□□□ 0.06
TOP3A-202ENST00000461127 TPD52P55327 224 aaPredicted RBP15.43■□□□□ 0.06
TOP3A-202ENST00000461127 WDR4P57081 412 aaKnown RBP15.43■□□□□ 0.06
TOP3A-202ENST00000461127 RUNX1T1Q06455 604 aa15.43■□□□□ 0.06
TOP3A-202ENST00000461127 FAPQ12884 760 aa15.43■□□□□ 0.06
TOP3A-202ENST00000461127 PRICKLE4Q2TBC4 344 aa15.43■□□□□ 0.06
TOP3A-202ENST00000461127 LIPJQ5W064 366 aa15.43■□□□□ 0.06
TOP3A-202ENST00000461127 PPP4R4Q6NUP7 873 aa15.43■□□□□ 0.06
TOP3A-202ENST00000461127 FAM111BQ6SJ93 734 aa15.43■□□□□ 0.06
TOP3A-202ENST00000461127 NUDCD3Q8IVD9 361 aa15.43■□□□□ 0.06
TOP3A-202ENST00000461127 CCDC126Q96EE4 140 aa15.43■□□□□ 0.06
TOP3A-202ENST00000461127 SLC35A4Q96G79 324 aa15.43■□□□□ 0.06
TOP3A-202ENST00000461127 ATOH8Q96SQ7 321 aa15.43■□□□□ 0.06
TOP3A-202ENST00000461127 ADOQ96SZ5 270 aa15.43■□□□□ 0.06
TOP3A-202ENST00000461127 NTMT1Q9BV86 223 aa15.43■□□□□ 0.06
TOP3A-202ENST00000461127 ESRP2Q9H6T0 727 aaKnown RBP15.43■□□□□ 0.06
TOP3A-202ENST00000461127 PPP4R1LQ9P1A2 415 aa15.43■□□□□ 0.06
TOP3A-202ENST00000461127 GPR52Q9Y2T5 361 aa15.43■□□□□ 0.06
TOP3A-202ENST00000461127 SNX8Q9Y5X2 465 aa15.43■□□□□ 0.06
TOP3A-202ENST00000461127 G3V2L1 256 aa15.42■□□□□ 0.06
TOP3A-202ENST00000461127 H3BML4 177 aa15.42■□□□□ 0.06
TOP3A-202ENST00000461127 UBXN8O00124 270 aa15.42■□□□□ 0.06
TOP3A-202ENST00000461127 BPGMP07738 259 aa15.42■□□□□ 0.06
TOP3A-202ENST00000461127 SBK3P0C264 359 aa15.42■□□□□ 0.06
TOP3A-202ENST00000461127 DHRS4L1P0CG22 281 aa15.42■□□□□ 0.06
TOP3A-202ENST00000461127 HK1P19367 917 aa15.42■□□□□ 0.06
TOP3A-202ENST00000461127 IL12BP29460 328 aa15.42■□□□□ 0.06
TOP3A-202ENST00000461127 CASP9P55211 416 aa15.42■□□□□ 0.06
TOP3A-202ENST00000461127 CLDN15P56746 228 aa15.42■□□□□ 0.06
TOP3A-202ENST00000461127 GANABQ14697 944 aaKnown RBP15.42■□□□□ 0.06
TOP3A-202ENST00000461127 PCLAFQ15004 111 aa15.42■□□□□ 0.06
TOP3A-202ENST00000461127 TMEM249Q2WGJ8 235 aa15.42■□□□□ 0.06
TOP3A-202ENST00000461127 SLC22A9Q8IVM8 553 aa15.42■□□□□ 0.06
TOP3A-202ENST00000461127 TMEM151AQ8N4L1 468 aa15.42■□□□□ 0.06
TOP3A-202ENST00000461127 TEX9Q8N6V9 391 aa15.42■□□□□ 0.06
TOP3A-202ENST00000461127 OR52R1Q8NGF1 315 aa15.42■□□□□ 0.06
TOP3A-202ENST00000461127 UBTD2Q8WUN7 234 aa15.42■□□□□ 0.06
TOP3A-202ENST00000461127 MAT2BQ9NZL9 334 aa15.42■□□□□ 0.06
TOP3A-202ENST00000461127 ZNF337Q9Y3M9 751 aa15.42■□□□□ 0.06
TOP3A-202ENST00000461127 H0YIV9 168 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 SEMA3DO95025 777 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 ATP1B1P05026 303 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 THBS1P07996 1170 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 CSNK2A2P19784 350 aaPredicted RBP15.41■□□□□ 0.06
TOP3A-202ENST00000461127 ALDH3A1P30838 453 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 MDH1P40925 334 aaKnown RBP15.41■□□□□ 0.06
TOP3A-202ENST00000461127 GYS2P54840 703 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 PSPHP78330 225 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 MRPS22P82650 360 aaKnown RBP15.41■□□□□ 0.06
TOP3A-202ENST00000461127 GUCY1A3Q02108 690 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 MGAT2Q10469 447 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 NRF1Q16656 503 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 PFKFB4Q16877 469 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.41■□□□□ 0.06
TOP3A-202ENST00000461127 C10orf107Q8IVU9 208 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 METTL25Q8N6Q8 603 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 PTGR2Q8N8N7 351 aaPredicted RBP15.41■□□□□ 0.06
TOP3A-202ENST00000461127 STEAP2Q8NFT2 490 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 LILRB1Q8NHL6 650 aaPredicted RBP15.41■□□□□ 0.06
TOP3A-202ENST00000461127 GMPPAQ96IJ6 420 aaPredicted RBP15.41■□□□□ 0.06
TOP3A-202ENST00000461127 TNFRSF13CQ96RJ3 184 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 SERPINI1Q99574 410 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 MECRQ9BV79 373 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 DSN1Q9H410 356 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 PTGES2Q9H7Z7 377 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 STOML1Q9UBI4 398 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 ZNF639Q9UID6 485 aa15.41■□□□□ 0.06
TOP3A-202ENST00000461127 GPR55Q9Y2T6 319 aaPredicted RBP15.41■□□□□ 0.06
TOP3A-202ENST00000461127 A8MT66 165 aa15.4■□□□□ 0.06
TOP3A-202ENST00000461127 FOXE1O00358 373 aaPredicted RBP15.4■□□□□ 0.06
TOP3A-202ENST00000461127 UBFD1O14562 309 aaKnown RBP15.4■□□□□ 0.06
TOP3A-202ENST00000461127 SSX4O60224 188 aa15.4■□□□□ 0.06
TOP3A-202ENST00000461127 UGDHO60701 494 aa15.4■□□□□ 0.06
TOP3A-202ENST00000461127 NDUFS7O75251 213 aa15.4■□□□□ 0.06
TOP3A-202ENST00000461127 GUCY1B2O75343 617 aa15.4■□□□□ 0.06
TOP3A-202ENST00000461127 AQP8O94778 261 aa15.4■□□□□ 0.06
TOP3A-202ENST00000461127 CBX7O95931 251 aa15.4■□□□□ 0.06
TOP3A-202ENST00000461127 SRD5A1P18405 259 aa15.4■□□□□ 0.06
TOP3A-202ENST00000461127 PSMB1P20618 241 aaKnown RBP15.4■□□□□ 0.06
TOP3A-202ENST00000461127 IL11P20809 199 aa15.4■□□□□ 0.06
TOP3A-202ENST00000461127 FEN1P39748 380 aaKnown RBP15.4■□□□□ 0.06
TOP3A-202ENST00000461127 PRKAA2P54646 552 aa15.4■□□□□ 0.06
TOP3A-202ENST00000461127 CLDN20P56880 219 aa15.4■□□□□ 0.06
TOP3A-202ENST00000461127 VLDLRP98155 873 aa15.4■□□□□ 0.06
TOP3A-202ENST00000461127 CPSF6Q16630 551 aaKnown RBP eCLIP15.4■□□□□ 0.06
TOP3A-202ENST00000461127 ZNF672Q499Z4 452 aaPredicted RBP15.4■□□□□ 0.06
TOP3A-202ENST00000461127 LARP4Q71RC2 724 aaKnown RBP eCLIP15.4■□□□□ 0.06
TOP3A-202ENST00000461127 PAGE2Q7Z2X7 111 aa15.4■□□□□ 0.06
TOP3A-202ENST00000461127 ROBO4Q8WZ75 1007 aa15.4■□□□□ 0.06
TOP3A-202ENST00000461127 PHF21BQ96EK2 531 aa15.4■□□□□ 0.06
TOP3A-202ENST00000461127 C11orf24Q96F05 449 aaPredicted RBP15.4■□□□□ 0.06
TOP3A-202ENST00000461127 FAIMQ9NVQ4 179 aa15.4■□□□□ 0.06
TOP3A-202ENST00000461127 OXSMQ9NWU1 459 aa15.4■□□□□ 0.06
TOP3A-202ENST00000461127 AHSPQ9NZD4 102 aa15.4■□□□□ 0.06
TOP3A-202ENST00000461127 GDF2Q9UK05 429 aaPredicted RBP15.4■□□□□ 0.06
TOP3A-202ENST00000461127 PSME2Q9UL46 239 aa15.4■□□□□ 0.06
TOP3A-202ENST00000461127 ALPK2Q86TB3 2170 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms