RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 EQTNQ9NQ60 294 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 SEMA4GQ9NTN9 838 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 POT1Q9NUX5 634 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 QPCTLQ9NXS2 382 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 PLEKHB1Q9UF11 243 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-202ENST00000459727 APOBEC3BQ9UH17 382 aaKnown RBP8.26□□□□□ -1.09
HDAC3-202ENST00000459727 MOSPD1Q9UJG1 213 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 MED31Q9Y3C7 131 aa8.26□□□□□ -1.09
HDAC3-202ENST00000459727 ALPK3Q96L96 1907 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 MYOFQ9NZM1 2061 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 KIAA0100Q14667 2235 aaKnown RBP8.25□□□□□ -1.09
HDAC3-202ENST00000459727 TBC1D3EA0A087X179 549 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 RIIAD1A6NNX1 92 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 C2orf74A8MZ97 194 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 GABRPO00591 440 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 PLD2O14939 933 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 SERPINA3P01011 423 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 MT-ND5P03915 603 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 YES1P07947 543 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 IGFBP1P08833 259 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-202ENST00000459727 ADRA2AP08913 450 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 ZNF888P0CJ79 500 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-202ENST00000459727 SMIM10L1P0DMW3 83 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 SLC2A2P11168 524 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-202ENST00000459727 LAMP2P13473 410 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 GNSP15586 552 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 ZNF3P17036 446 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 MYL9P24844 172 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 PEBP1P30086 187 aaKnown RBP8.25□□□□□ -1.09
HDAC3-202ENST00000459727 BMP8BP34820 402 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 MAP2K3P46734 347 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 PDX1P52945 283 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 CTBP2P56545 445 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 RAB8AP61006 207 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 RPS25P62851 125 aaKnown RBP8.25□□□□□ -1.09
HDAC3-202ENST00000459727 EEF1A1P68104 462 aaKnown RBP8.25□□□□□ -1.09
HDAC3-202ENST00000459727 FGL2Q14314 439 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 SF3A2Q15428 464 aaKnown RBP8.25□□□□□ -1.09
HDAC3-202ENST00000459727 ZNHIT3Q15649 155 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-202ENST00000459727 HSD17B12Q53GQ0 312 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 EXOSC6Q5RKV6 272 aaKnown RBP8.25□□□□□ -1.09
HDAC3-202ENST00000459727 ARHGAP11AQ6P4F7 1023 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 TMEM184AQ6ZMB5 413 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 ZNF836Q6ZNA1 936 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 TMPRSS11FQ6ZWK6 438 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 MEPCEQ7L2J0 689 aaKnown RBP8.25□□□□□ -1.09
HDAC3-202ENST00000459727 BMP8AQ7Z5Y6 402 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 NRARPQ7Z6K4 114 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 OOSP2Q86WS3 158 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 LRRC28Q86X40 367 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-202ENST00000459727 TRIM48Q8IWZ4 208 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 NRMQ8IXM6 262 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 LNX2Q8N448 690 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 ARIH2OSQ8N7S6 290 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 COX18Q8N8Q8 333 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 C7orf57Q8NEG2 295 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 ATP6V1C2Q8NEY4 427 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 OR8D4Q8NGM9 314 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 GATAD2BQ8WXI9 593 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 C16orf58Q96GQ5 468 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 SMIM10Q96HG1 83 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 UBL7Q96S82 380 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-202ENST00000459727 CCNL2Q96S94 520 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-202ENST00000459727 ZFYVE21Q9BQ24 234 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 TTYH2Q9BSA4 534 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 YIPF4Q9BSR8 244 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 NDC1Q9BTX1 674 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 PLA2G12AQ9BZM1 189 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 NDEL1Q9GZM8 345 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 RNF121Q9H920 327 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 TMEM27Q9HBJ8 222 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 RPRD1BQ9NQG5 326 aaKnown RBP8.25□□□□□ -1.09
HDAC3-202ENST00000459727 SACM1LQ9NTJ5 587 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 DDX28Q9NUL7 540 aaKnown RBP8.25□□□□□ -1.09
HDAC3-202ENST00000459727 C14orf119Q9NWQ9 140 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 HAO2Q9NYQ3 351 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 ACTR10Q9NZ32 417 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 CNIH4Q9P003 139 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 KLHL21Q9UJP4 597 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 DAPP1Q9UN19 280 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 SLC22A7Q9Y694 548 aa8.25□□□□□ -1.09
HDAC3-202ENST00000459727 TBC1D3DA0A087WVF3 549 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 TBC1D3IA0A087WXS9 549 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 ARPC4-TTLL3A0A0A6YYG9 625 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 KIR2DS5A0A0G2JLQ3 304 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 A0A0G2JNG1 304 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 MEIOCA2RUB1 952 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 LRRC72A6NJI9 287 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 OR52A4PA6NMU1 304 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 TBC1D3LB9A6J9 549 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 PRR23D1E9PI22 279 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-202ENST00000459727 KIR2DS3K7RE56 304 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 CHP2O43745 196 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 ORC5O43913 435 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 TBC1D3HP0C7X1 549 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 PRR23D2P0DMB1 279 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-202ENST00000459727 C8orf89P0DMQ9 161 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 SPNP16150 400 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 FUT4P22083 530 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 HNRNPA2B1P22626 353 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms