RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 FAM199XQ6PEV8 388 aaPredicted RBP22.58■■□□□ 1.2
U2AF1-204ENST00000459639 CPEB2Q7Z5Q1 589 aaKnown RBP22.58■■□□□ 1.2
U2AF1-204ENST00000459639 TAGAPQ8N103 731 aa22.58■■□□□ 1.2
U2AF1-204ENST00000459639 B3GNT7Q8NFL0 401 aa22.58■■□□□ 1.2
U2AF1-204ENST00000459639 OIT3Q8WWZ8 545 aa22.58■■□□□ 1.2
U2AF1-204ENST00000459639 SEMA4CQ9C0C4 833 aa22.58■■□□□ 1.2
U2AF1-204ENST00000459639 KIF17Q9P2E2 1029 aa22.58■■□□□ 1.2
U2AF1-204ENST00000459639 RHCGQ9UBD6 479 aa22.58■■□□□ 1.2
U2AF1-204ENST00000459639 PCNX2A6NKB5 2137 aa22.58■■□□□ 1.2
U2AF1-204ENST00000459639 IGHV3-20A0A0C4DH32 117 aa22.57■■□□□ 1.2
U2AF1-204ENST00000459639 ARRDC5A6NEK1 342 aa22.57■■□□□ 1.2
U2AF1-204ENST00000459639 NPIPB9F8W1W9 429 aa22.57■■□□□ 1.2
U2AF1-204ENST00000459639 H0YAE9 185 aa22.57■■□□□ 1.2
U2AF1-204ENST00000459639 PLD2O14939 933 aa22.57■■□□□ 1.2
U2AF1-204ENST00000459639 STK17BO94768 372 aa22.57■■□□□ 1.2
U2AF1-204ENST00000459639 DAPP51397 102 aa22.57■■□□□ 1.2
U2AF1-204ENST00000459639 ZNF141Q15928 474 aa22.57■■□□□ 1.2
U2AF1-204ENST00000459639 MRPL2Q5T653 305 aaKnown RBP22.57■■□□□ 1.2
U2AF1-204ENST00000459639 PAPD4Q6PIY7 484 aaKnown RBP22.57■■□□□ 1.2
U2AF1-204ENST00000459639 C17orf47Q8NEP4 570 aa22.57■■□□□ 1.2
U2AF1-204ENST00000459639 NFAM1Q8NET5 270 aaPredicted RBP22.57■■□□□ 1.2
U2AF1-204ENST00000459639 OR10G2Q8NGC3 310 aa22.57■■□□□ 1.2
U2AF1-204ENST00000459639 CNBD2Q96M20 576 aa22.57■■□□□ 1.2
U2AF1-204ENST00000459639 GAL3ST4Q96RP7 486 aa22.57■■□□□ 1.2
U2AF1-204ENST00000459639 WWTR1Q9GZV5 400 aa22.57■■□□□ 1.2
U2AF1-204ENST00000459639 RLIMQ9NVW2 624 aa22.57■■□□□ 1.2
U2AF1-204ENST00000459639 MRTO4Q9UKD2 239 aaKnown RBP22.57■■□□□ 1.2
U2AF1-204ENST00000459639 PCDHGA3Q9Y5H0 932 aa22.57■■□□□ 1.2
U2AF1-204ENST00000459639 CDHR4A6H8M9 788 aa22.56■■□□□ 1.2
U2AF1-204ENST00000459639 CLDN24A6NM45 220 aa22.56■■□□□ 1.2
U2AF1-204ENST00000459639 ATP12AP54707 1039 aa22.56■■□□□ 1.2
U2AF1-204ENST00000459639 PSPHP78330 225 aa22.56■■□□□ 1.2
U2AF1-204ENST00000459639 ADARB1P78563 741 aaKnown RBP22.56■■□□□ 1.2
U2AF1-204ENST00000459639 ZSWIM7Q19AV6 140 aa22.56■■□□□ 1.2
U2AF1-204ENST00000459639 OFCC1Q8IZS5 231 aa22.56■■□□□ 1.2
U2AF1-204ENST00000459639 ATG16L2Q8NAA4 619 aa22.56■■□□□ 1.2
U2AF1-204ENST00000459639 CYGBQ8WWM9 190 aa22.56■■□□□ 1.2
U2AF1-204ENST00000459639 ALPK1Q96QP1 1244 aa22.56■■□□□ 1.2
U2AF1-204ENST00000459639 LPAR4Q99677 370 aa22.56■■□□□ 1.2
U2AF1-204ENST00000459639 FNDC11Q9BVV2 318 aa22.56■■□□□ 1.2
U2AF1-204ENST00000459639 TOR3AQ9H497 397 aa22.56■■□□□ 1.2
U2AF1-204ENST00000459639 TEX51A0A1B0GUA7 166 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 AP3D1O14617 1153 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 TO15178 435 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 FRS3O43559 492 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 CCNB2O95067 398 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 IL33O95760 270 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 CD63P08962 238 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 ANXA8P13928 327 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 ELAVL4P26378 380 aaKnown RBP22.55■■□□□ 1.2
U2AF1-204ENST00000459639 PIN1Q13526 163 aaPredicted RBP22.55■■□□□ 1.2
U2AF1-204ENST00000459639 PDZK1Q5T2W1 519 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 SLCO6A1Q86UG4 719 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 MBOAT4Q96T53 435 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 WDR77Q9BQA1 342 aaPredicted RBP22.55■■□□□ 1.2
U2AF1-204ENST00000459639 TMCC3Q9ULS5 477 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 A0A1W2PRQ8 180 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 PMS2P1A4D2B8 440 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 PCDH17O14917 1159 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 DKK1O94907 266 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 DLGAP3O95886 979 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 CCNYL3P0C7X3 344 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 CDH2P19022 906 aaPredicted RBP22.55■■□□□ 1.2
U2AF1-204ENST00000459639 DGCR6Q14129 220 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 ZIK1Q3SY52 487 aaPredicted RBP22.55■■□□□ 1.2
U2AF1-204ENST00000459639 FGD3Q5JSP0 725 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 ZNF441Q8N8Z8 693 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 APCDD1LQ8NCL9 501 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 DEFB124Q8NES8 71 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 VMP1Q96GC9 406 aa22.55■■□□□ 1.2
U2AF1-204ENST00000459639 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.55■■□□□ 1.2
U2AF1-204ENST00000459639 WDR87Q6ZQQ6 2873 aa22.54■■□□□ 1.2
U2AF1-204ENST00000459639 SPEGQ15772 3267 aa22.54■■□□□ 1.2
U2AF1-204ENST00000459639 LOC102723996A0A087X1L8 192 aa22.54■■□□□ 1.2
U2AF1-204ENST00000459639 FAAHO00519 579 aa22.54■■□□□ 1.2
U2AF1-204ENST00000459639 OXSR1O95747 527 aaPredicted RBP22.54■■□□□ 1.2
U2AF1-204ENST00000459639 FUT4P22083 530 aa22.54■■□□□ 1.2
U2AF1-204ENST00000459639 LCN1P31025 176 aa22.54■■□□□ 1.2
U2AF1-204ENST00000459639 FGFBP1Q14512 234 aa22.54■■□□□ 1.2
U2AF1-204ENST00000459639 DCST1Q5T197 706 aa22.54■■□□□ 1.2
U2AF1-204ENST00000459639 C6orf15Q6UXA7 325 aaPredicted RBP22.54■■□□□ 1.2
U2AF1-204ENST00000459639 RANBP3LQ86VV4 465 aaPredicted RBP22.54■■□□□ 1.2
U2AF1-204ENST00000459639 TSPYL5Q86VY4 417 aaPredicted RBP22.54■■□□□ 1.2
U2AF1-204ENST00000459639 GRAMD2AQ8IUY3 354 aa22.54■■□□□ 1.2
U2AF1-204ENST00000459639 CMIPQ8IY22 773 aa22.54■■□□□ 1.2
U2AF1-204ENST00000459639 WDR36Q8NI36 951 aaKnown RBP22.54■■□□□ 1.2
U2AF1-204ENST00000459639 HSPBAP1Q96EW2 488 aa22.54■■□□□ 1.2
U2AF1-204ENST00000459639 LMF1Q96S06 567 aa22.54■■□□□ 1.2
U2AF1-204ENST00000459639 FUZQ9BT04 418 aa22.54■■□□□ 1.2
U2AF1-204ENST00000459639 POLR2J2Q9GZM3 115 aaKnown RBP22.54■■□□□ 1.2
U2AF1-204ENST00000459639 HOXD1Q9GZZ0 328 aa22.54■■□□□ 1.2
U2AF1-204ENST00000459639 POLR2J3Q9H1A7 115 aaKnown RBP22.54■■□□□ 1.2
U2AF1-204ENST00000459639 KRT84Q9NSB2 600 aa22.54■■□□□ 1.2
U2AF1-204ENST00000459639 TRBV4-1A0A0J9YWV2 114 aa22.53■■□□□ 1.2
U2AF1-204ENST00000459639 TPST2O60704 377 aa22.53■■□□□ 1.2
U2AF1-204ENST00000459639 KLF7O75840 302 aaPredicted RBP22.53■■□□□ 1.2
U2AF1-204ENST00000459639 MYF6P23409 242 aa22.53■■□□□ 1.2
U2AF1-204ENST00000459639 IFNA8P32881 189 aa22.53■■□□□ 1.2
U2AF1-204ENST00000459639 ZNF136P52737 540 aa22.53■■□□□ 1.2
U2AF1-204ENST00000459639 LIMK1P53667 647 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms