RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 IGF2-ASQ6U949 168 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 CARM1Q86X55 608 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 LINC00471Q8N535 108 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 DHRSXQ8N5I4 330 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 SMYD1Q8NB12 490 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 SLC16A11Q8NCK7 471 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 MORN4Q8NDC4 146 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 ZNF248Q8NDW4 579 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 ZNF555Q8NEP9 628 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 FAM110BQ8TC76 370 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 MAGEE2Q8TD90 523 aaPredicted RBP8.3□□□□□ -1.08
VPS50-207ENST00000458530 SLC35A4Q96G79 324 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 SLC46A1Q96NT5 459 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 OCSTAMPQ9BR26 566 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 ARHGAP9Q9BRR9 750 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 POLR2J2Q9GZM3 115 aaKnown RBP8.3□□□□□ -1.08
VPS50-207ENST00000458530 POLR2J3Q9H1A7 115 aaKnown RBP8.3□□□□□ -1.08
VPS50-207ENST00000458530 OR10A5Q9H207 317 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 SLC26A1Q9H2B4 701 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 SLC38A1Q9H2H9 487 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 WDR54Q9H977 334 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 NTN4Q9HB63 628 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 NECTIN3Q9NQS3 549 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 PNO1Q9NRX1 252 aaKnown RBP8.3□□□□□ -1.08
VPS50-207ENST00000458530 NDUFAF4Q9P032 175 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 MKL2Q9ULH7 1088 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 TMCC3Q9ULS5 477 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 ABCG2Q9UNQ0 655 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 SH3GLB1Q9Y371 365 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 OR10H1Q9Y4A9 318 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 TMEM184BQ9Y519 407 aaPredicted RBP8.3□□□□□ -1.08
VPS50-207ENST00000458530 AP4B1Q9Y6B7 739 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 ARRDC5A6NEK1 342 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 H0YAE9 185 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 TGFBR3LH3BV60 316 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 PYCARD-AS1I3L0S3 204 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 PDLIM1O00151 329 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 TNFRSF11BO00300 401 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 ACOX3O15254 700 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 KIAA0513O60268 411 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 UGT2B17O75795 530 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 GADD45GO95257 159 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 OXSR1O95747 527 aaPredicted RBP8.29□□□□□ -1.08
VPS50-207ENST00000458530 LGI1O95970 557 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 ALPLP05186 524 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 ZGLP1P0C6A0 271 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 IL7RP16871 459 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 IGFBP5P24593 272 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 LCN1P31025 176 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 GABRA3P34903 492 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 CAPGP40121 348 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 MAP3K8P41279 467 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 EMDP50402 254 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 PDX1P52945 283 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 CHRNEQ04844 493 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 DUSP8Q13202 625 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 LY6DQ14210 128 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 MAPK11Q15759 364 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 DECR1Q16698 335 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 COLEC12Q5KU26 742 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 DCAF12Q5T6F0 453 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 RNF220Q5VTB9 566 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 CDCP2Q5VXM1 449 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 TTC23Q5W5X9 447 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 KRT80Q6KB66 452 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 FRRS1Q6ZNA5 592 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 SLC29A4Q7RTT9 530 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 OVCH1Q7RTY7 1134 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 RANBP3LQ86VV4 465 aaPredicted RBP8.29□□□□□ -1.08
VPS50-207ENST00000458530 MARVELD2Q8N4S9 558 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 ZNF527Q8NB42 609 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 OR10Q1Q8NGQ4 319 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 OR52P1PQ8NH57 321 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 STT3BQ8TCJ2 826 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 PHF10Q8WUB8 498 aaKnown RBP8.29□□□□□ -1.08
VPS50-207ENST00000458530 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.29□□□□□ -1.08
VPS50-207ENST00000458530 OTUB1Q96FW1 271 aaPredicted RBP8.29□□□□□ -1.08
VPS50-207ENST00000458530 LIN37Q96GY3 246 aaPredicted RBP8.29□□□□□ -1.08
VPS50-207ENST00000458530 VSTM2LQ96N03 204 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 ZNF570Q96NI8 536 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 DEPDC7Q96QD5 511 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 SDF2Q99470 211 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 ADI1Q9BV57 179 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 VN1R1Q9GZP7 353 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 SAP130Q9H0E3 1048 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 ANKRA2Q9H9E1 313 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 ZNF556Q9HAH1 456 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 CPNE5Q9HCH3 593 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 OCIAD1Q9NX40 245 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 SLC39A1Q9NY26 324 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 ZNF443Q9Y2A4 671 aaPredicted RBP8.29□□□□□ -1.08
VPS50-207ENST00000458530 BSNQ9UPA5 3926 aa8.29□□□□□ -1.08
VPS50-207ENST00000458530 EXPH5Q8NEV8 1989 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 BOD1L1Q8NFC6 3051 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 MYOCOSA0A1B0GUC4 107 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 PRAMEF27A3QJZ7 478 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 MAGEA13PA6NCF6 341 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 FRG2CA6NGY1 282 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 AGAP5A6NIR3 686 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 MEN1O00255 615 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms