RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 OR5M1Q8NGP8 315 aa14.23□□□□□ -0.13
CHCHD3-204ENST00000457942 OR2W6PQ8NHA6 318 aa14.23□□□□□ -0.13
CHCHD3-204ENST00000457942 RNF138Q8WVD3 245 aa14.23□□□□□ -0.13
CHCHD3-204ENST00000457942 PIK3R3Q92569 461 aa14.23□□□□□ -0.13
CHCHD3-204ENST00000457942 SLC9A6Q92581 669 aa14.23□□□□□ -0.13
CHCHD3-204ENST00000457942 APOPT1Q96IL0 206 aa14.23□□□□□ -0.13
CHCHD3-204ENST00000457942 UCN2Q96RP3 112 aa14.23□□□□□ -0.13
CHCHD3-204ENST00000457942 CCT7Q99832 543 aa14.23□□□□□ -0.13
CHCHD3-204ENST00000457942 TRMOQ9BU70 441 aa14.23□□□□□ -0.13
CHCHD3-204ENST00000457942 GATA5Q9BWX5 397 aaPredicted RBP14.23□□□□□ -0.13
CHCHD3-204ENST00000457942 REEP4Q9H6H4 257 aa14.23□□□□□ -0.13
CHCHD3-204ENST00000457942 A0A1W2PNV4 684 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 GXYLT2A0PJZ3 443 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 SH3D21A4FU49 640 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 TTC36A6NLP5 189 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 B4DXG7 233 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 CASKO14936 926 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 HCRTR2O43614 444 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 TRIM13O60858 407 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 SDC1P18827 310 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 PRPH2P23942 346 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 HOXC12P31275 282 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 MANFP55145 182 aaKnown RBP14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 B3GALT5-AS1P59052 145 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 SIRPAP78324 504 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 BCL2A1Q16548 175 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 CIARTQ8N365 385 aaPredicted RBP14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 OR2T11Q8NH01 316 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 CEP70Q8NHQ1 597 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 DUSP19Q8WTR2 217 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 JADE3Q92613 823 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 ZBTB9Q96C00 473 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 ZBED6CLQ96FA7 236 aaPredicted RBP14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 CHMP6Q96FZ7 201 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 FAM111AQ96PZ2 611 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 PIGQQ9BRB3 760 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 PINK1Q9BXM7 581 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 NEUROD4Q9HD90 331 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 CCL27Q9Y4X3 112 aa14.22□□□□□ -0.13
CHCHD3-204ENST00000457942 PCNX3Q9H6A9 2034 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 OR2M5A3KFT3 312 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 ANGPTL1O95841 491 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 DDX5P17844 614 aaKnown RBP14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 RPS3AP61247 264 aaKnown RBP14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 NKX6-1P78426 367 aaPredicted RBP14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 SLC18A2Q05940 514 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 IFFO1Q0D2I5 559 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 KIAA0040Q15053 153 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 GRAMD1BQ3KR37 738 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 ZNF385BQ569K4 471 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 KANK2Q63ZY3 851 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 GALNT10Q86SR1 603 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 CDRT4Q8N9R6 151 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 NUP43Q8NFH3 380 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 AGR3Q8TD06 166 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 TWIST2Q8WVJ9 160 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 C1GALT1C1Q96EU7 318 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 MS4A4EQ96PG1 132 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 EML4Q9HC35 981 aaKnown RBP14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 NDRG3Q9UGV2 375 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 BAIAP2L1Q9UHR4 511 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 VDAC3Q9Y277 283 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 TMED5Q9Y3A6 229 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 ZNF337Q9Y3M9 751 aa14.21□□□□□ -0.13
CHCHD3-204ENST00000457942 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 TMEM233B4DJY2 109 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 H0YC42 278 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 H7C1Q1 480 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 LINC01387J3KSC0 135 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 TNFSF13O75888 250 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 CHRNGP07510 517 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 IFI6P09912 130 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 HPGDP15428 266 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 EFNA1P20827 205 aaPredicted RBP14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 HPCAL1P37235 193 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 ASMTP46597 345 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 KCNJ5P48544 419 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 TPD52P55327 224 aaPredicted RBP14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 C17orf67Q0P5P2 114 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 SGCBQ16585 318 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 Q5PR19 223 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 VWA1Q6PCB0 445 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 Q6ZSR9 355 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 CXXC5Q7LFL8 322 aaKnown RBP14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 EXOC3L1Q86VI1 746 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 RIBC1Q8N443 379 aaPredicted RBP14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 COX18Q8N8Q8 333 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 GATSQ8NAP1 163 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 AENQ8WTP8 325 aaKnown RBP14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.2□□□□□ -0.146e-6■■■■■ 28.1
CHCHD3-204ENST00000457942 FIG4Q92562 907 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 DACH2Q96NX9 599 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 PARD6BQ9BYG5 372 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 PRRG4Q9BZD6 226 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 RTN4RQ9BZR6 473 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 EIF3LQ9Y262 564 aaKnown RBP14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 DNAJC15Q9Y5T4 150 aa14.2□□□□□ -0.14
CHCHD3-204ENST00000457942 A8MXE2 369 aa14.19□□□□□ -0.14
CHCHD3-204ENST00000457942 TMEM114B3SHH9 223 aa14.19□□□□□ -0.14
CHCHD3-204ENST00000457942 SHISA8B8ZZ34 492 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms