RNA–Protein interactions for RNA: ENST00000456608.1

CASC4P1-201, Transcript of cancer susceptibility 4 pseudogene 1, humanhuman

BASIC

Gene CASC4P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4P1-201ENST00000456608 RBM4BQ9BQ04 359 aaKnown RBP12.05□□□□□ -0.48
CASC4P1-201ENST00000456608 RBM4Q9BWF3 364 aaKnown RBP12.05□□□□□ -0.48
CASC4P1-201ENST00000456608 B3GNT4Q9C0J1 378 aa12.05□□□□□ -0.48
CASC4P1-201ENST00000456608 WWTR1Q9GZV5 400 aa12.05□□□□□ -0.48
CASC4P1-201ENST00000456608 KLHL28Q9NXS3 571 aa12.05□□□□□ -0.48
CASC4P1-201ENST00000456608 SLC13A4Q9UKG4 626 aa12.05□□□□□ -0.48
CASC4P1-201ENST00000456608 PADI1Q9ULC6 663 aa12.05□□□□□ -0.48
CASC4P1-201ENST00000456608 A4GNTQ9UNA3 340 aa12.05□□□□□ -0.48
CASC4P1-201ENST00000456608 LRCH1Q9Y2L9 728 aa12.05□□□□□ -0.48
CASC4P1-201ENST00000456608 PTRH2Q9Y3E5 179 aaKnown RBP12.05□□□□□ -0.48
CASC4P1-201ENST00000456608 AP4B1Q9Y6B7 739 aa12.05□□□□□ -0.48
CASC4P1-201ENST00000456608 EP300Q09472 2414 aaPredicted RBP12.05□□□□□ -0.48
CASC4P1-201ENST00000456608 MUC6Q6W4X9 2439 aa12.05□□□□□ -0.48
CASC4P1-201ENST00000456608 CLDN24A6NM45 220 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 PCDH17O14917 1159 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 DENRO43583 198 aaKnown RBP12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 PRKNO60260 465 aaPredicted RBP12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 IL33O95760 270 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 RAB40ALP0C0E4 278 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 CCNYL3P0C7X3 344 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 FUT4P22083 530 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 PRKACGP22612 351 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 RFX3P48380 749 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 ARHGDIAP52565 204 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 ATP12AP54707 1039 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 PSMD4P55036 377 aaKnown RBP12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 CDH12P55289 794 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 SLC26A5P58743 744 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 RNF4P78317 190 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 GANABQ14697 944 aaKnown RBP12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 LAPTM4AQ15012 233 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 PCOLCEQ15113 449 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 DECR1Q16698 335 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 NHSL2Q5HYW2 709 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 TMEM164Q5U3C3 297 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 HLA-DQA1Q5Y7H0 255 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 ANKRD34AQ69YU3 496 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 ASCL5Q7RTU5 278 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 AMER2Q8N7J2 671 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 CT55Q8WUE5 264 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 OIT3Q8WWZ8 545 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 C8orf44Q96CB5 159 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 HSPBAP1Q96EW2 488 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 PRRC1Q96M27 445 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 GAL3ST4Q96RP7 486 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 LMF1Q96S06 567 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 OSBPL11Q9BXB4 747 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 MFRPQ9BY79 579 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 EVA1AQ9H8M9 152 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 SMURF2Q9HAU4 748 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 RLIMQ9NVW2 624 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 SMPD3Q9NY59 655 aaPredicted RBP12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 FOXJ2Q9P0K8 574 aa12.04□□□□□ -0.48
CASC4P1-201ENST00000456608 A0A1W2PQ72 361 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 CDHR4A6H8M9 788 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 FRS3O43559 492 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 TPST2O60704 377 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 SEC24DO94855 1032 aaPredicted RBP12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 GADD45GO95257 159 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 IGHEP01854 428 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 LCN1P31025 176 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 FOLR3P41439 243 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 RGS8P57771 180 aaPredicted RBP12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 PSPHP78330 225 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 PLAURQ03405 335 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 TARDBPQ13148 414 aaKnown RBP eCLIP12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 FGFBP1Q14512 234 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 EXOC3L2Q2M3D2 409 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 COLEC12Q5KU26 742 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 PDZK1Q5T2W1 519 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 C6orf52Q5T4I8 152 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 MRPL2Q5T653 305 aaKnown RBP12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 FAM69BQ5VUD6 431 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 TSPYL5Q86VY4 417 aaPredicted RBP12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 TMPRSS12Q86WS5 348 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 OR8K3Q8NH51 312 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 NUBPLQ8TB37 319 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 GIPC3Q8TF64 312 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 NR4A3Q92570 626 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 TP53INP1Q96A56 240 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 RDH12Q96NR8 316 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 PHOX2BQ99453 314 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 PSD2Q9BQI7 771 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 NRSN2Q9GZP1 204 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 HOXD1Q9GZZ0 328 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 NMNAT1Q9HAN9 279 aaPredicted RBP12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 PDP1Q9P0J1 537 aaPredicted RBP12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 RHCGQ9UBD6 479 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 TMEFF2Q9UIK5 374 aaPredicted RBP12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 MRTO4Q9UKD2 239 aaKnown RBP12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 HEATR5AQ86XA9 2040 aa12.03□□□□□ -0.48
CASC4P1-201ENST00000456608 TSPAN2O60636 221 aa12.02□□□□□ -0.49
CASC4P1-201ENST00000456608 TNFSF15O95150 251 aa12.02□□□□□ -0.49
CASC4P1-201ENST00000456608 H1F0P07305 194 aaKnown RBP12.02□□□□□ -0.49
CASC4P1-201ENST00000456608 THRBP10828 461 aa12.02□□□□□ -0.49
CASC4P1-201ENST00000456608 COX6A1P12074 109 aa12.02□□□□□ -0.49
CASC4P1-201ENST00000456608 DAPP51397 102 aa12.02□□□□□ -0.49
CASC4P1-201ENST00000456608 NR0B1P51843 470 aaKnown RBP12.02□□□□□ -0.49
CASC4P1-201ENST00000456608 ZNF136P52737 540 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms