RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 SLC46A3Q7Z3Q1 461 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 SPRED1Q7Z699 444 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 PTRH1Q86Y79 214 aaKnown RBP4.96□□□□□ -1.62
CSMD3-204ENST00000455883 EXTL2Q9UBQ6 330 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF107Q9UII5 783 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-204ENST00000455883 EXO1Q9UQ84 846 aaKnown RBP4.96□□□□□ -1.62
CSMD3-204ENST00000455883 TRBV2A0A0J9YWF9 115 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 VSTM2BA6NLU5 285 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 A8MT66 165 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 EMC8O43402 210 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 TBL1XO60907 577 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 DEDDO75618 318 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 OSMP13725 252 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 SCGB2B2Q4G0G5 96 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 SYT6Q5T7P8 510 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 BCL2L15Q5TBC7 163 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 CCSAPQ6IQ19 270 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 NXPE4Q6UWF7 544 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 ENPP6Q6UWR7 440 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 CISD2Q8N5K1 135 aaKnown RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 RAB3CQ96E17 227 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 IL12RB2Q99665 862 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 PDGFDQ9GZP0 370 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 SAP130Q9H0E3 1048 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 CLMPQ9H6B4 373 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 DCAF13Q9NV06 445 aaKnown RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 OLAHQ9NV23 265 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 FAM118AQ9NWS6 357 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 NCDNQ9UBB6 729 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 KIAA0513O60268 411 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 PRKACBP22694 351 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 TACR1P25103 407 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 HTRA4P83105 476 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 PLGLAQ15195 96 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 PDGFRLQ15198 375 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 CHRNA6Q15825 494 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 C6orf136Q5SQH8 315 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 CDH26Q8IXH8 852 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 CADM2Q8N3J6 435 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 CIB3Q96Q77 187 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 DPH7Q9BTV6 452 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 TNKS2Q9H2K2 1166 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 THADAQ6YHU6 1953 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 ACP2P11117 423 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 RAB6AP20340 208 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 AKT2P31751 481 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 WASP42768 502 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 CLCN3P51790 818 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 OR12D2P58182 307 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 MINDY4Q4G0A6 757 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF425Q6IV72 752 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 LRRC25Q8N386 305 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 C15orf54Q8N8G6 183 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 OR4K14Q8NGD5 310 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 OR1J2Q8NGS2 313 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 APH1BQ8WW43 257 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 SPRYD4Q8WW59 207 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 PAPOLGQ9BWT3 736 aaKnown RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 TSSK6Q9BXA6 273 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 PIF1Q9H611 641 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 TLX2O43763 284 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 GIPP09681 153 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 BMI1P35226 326 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 PLGLB1Q02325 96 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 PAGE3Q5JUK9 113 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 FAM111BQ6SJ93 734 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 VGLL2Q8N8G2 317 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 BBS1Q8NFJ9 593 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 OR1M1Q8NGA1 313 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 GATA6Q92908 595 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 ISG20Q96AZ6 181 aaKnown RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 ATG4CQ96DT6 458 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 PIGQQ9BRB3 760 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 SPANXDQ9BXN6 97 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 WASH6PQ9NQA3 447 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 STYXL1Q9Y6J8 313 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 M0R143 59 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 PNRC1Q12796 327 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 EMC4Q5J8M3 183 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF598Q86UK7 904 aaKnown RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 LIN7BQ9HAP6 207 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 ZDHHC2Q9UIJ5 367 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 MROH6A6NGR9 719 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 SERPINE2P07093 398 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 KLK3P07288 261 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 CHRM2P08172 466 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 TNFSF4P23510 183 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 RPS19P39019 145 aaKnown RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 WDR4P57081 412 aaKnown RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 HTD2P86397 168 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 ENDOGQ14249 297 aaKnown RBP4.95□□□□□ -1.62
CSMD3-204ENST00000455883 HEPHL1Q6MZM0 1159 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 UMODL1-AS1Q8N2C9 162 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 TMEM41AQ96HV5 264 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 DZANK1Q9NVP4 752 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 SUSD2Q9UGT4 822 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 A0A1W2PPL8 197 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 BOLA2-SMG1P6H3BVE0 249 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 H7BY64 318 aa4.95□□□□□ -1.62
CSMD3-204ENST00000455883 GATCO43716 136 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms