RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 OR6C4Q8NGE1 309 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.7□□□□□ -0.38
CLK3-203ENST00000454830 DPYSL5Q9BPU6 564 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 DUSP22Q9NRW4 184 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 CHST2Q9Y4C5 530 aa12.7□□□□□ -0.38
CLK3-203ENST00000454830 PCDH15Q96QU1 1955 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 MYL12BO14950 172 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 CBX7O95931 251 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 ADORA3P0DMS8 318 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 IFI30P13284 250 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 FNTBP49356 437 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 TSTQ16762 297 aaKnown RBP12.69□□□□□ -0.38
CLK3-203ENST00000454830 PRTGQ2VWP7 1150 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 FAAH2Q6GMR7 532 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 HEPHL1Q6MZM0 1159 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 SHFQ7M4L6 423 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 ZNF687Q8N1G0 1237 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 MORN4Q8NDC4 146 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 GAB3Q8WWW8 586 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 ACOT11Q8WXI4 607 aaPredicted RBP12.69□□□□□ -0.38
CLK3-203ENST00000454830 FCGR1BQ92637 280 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 DIO2Q92813 273 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 CNDP2Q96KP4 475 aaKnown RBP12.69□□□□□ -0.38
CLK3-203ENST00000454830 OR5M11Q96RB7 305 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 DOK1Q99704 481 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 DPH1Q9BZG8 443 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 SAP130Q9H0E3 1048 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 OCEL1Q9H607 264 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 FOLH1BQ9HBA9 442 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 TMEM27Q9HBJ8 222 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 FSCN3Q9NQT6 498 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 H2AFY2Q9P0M6 372 aaPredicted RBP12.69□□□□□ -0.38
CLK3-203ENST00000454830 ARID1BQ8NFD5 2236 aaPredicted RBP12.69□□□□□ -0.38
CLK3-203ENST00000454830 A0A087WV62 115 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 DUX1O43812 170 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 CTNSO60931 367 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 COL4A2P08572 1712 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 GADD45AP24522 165 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 CD1CP29017 333 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 TCTE1Q5JU00 501 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 DHRS4L2Q6PKH6 230 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 ALDH16A1Q8IZ83 802 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 CDK20Q8IZL9 346 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 TMCO5AQ8N6Q1 288 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 ABTB1Q969K4 478 aaPredicted RBP12.69□□□□□ -0.38
CLK3-203ENST00000454830 LGALS12Q96DT0 336 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 PRO3102Q9H379 93 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 GPN2Q9H9Y4 310 aaPredicted RBP12.69□□□□□ -0.38
CLK3-203ENST00000454830 Q9N2J8 555 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 KRCC1Q9NPI7 259 aaPredicted RBP12.69□□□□□ -0.38
CLK3-203ENST00000454830 RPS6KB2Q9UBS0 482 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 RPL36Q9Y3U8 105 aaKnown RBP12.69□□□□□ -0.38
CLK3-203ENST00000454830 FUT1P19526 365 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 SLC35F1Q5T1Q4 408 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 AP1ARQ63HQ0 302 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 SLC35F3Q8IY50 421 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 CNOT9Q92600 299 aaKnown RBP12.69□□□□□ -0.38
CLK3-203ENST00000454830 FKBP10Q96AY3 582 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 ZNF350Q9GZX5 532 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 CUTCQ9NTM9 273 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 PCDHGB1Q9Y5G3 927 aa12.69□□□□□ -0.38
CLK3-203ENST00000454830 CLPXO76031 633 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 KCNK2O95069 426 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 NSA2O95478 260 aaKnown RBP12.68□□□□□ -0.38
CLK3-203ENST00000454830 CFIP05156 583 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 SERPINB10P48595 397 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 ZNF91Q05481 1191 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 DUSP8Q13202 625 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 OR1Q1Q15612 314 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 DGUOKQ16854 277 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 C1orf94Q6P1W5 598 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 SHISA6Q6ZSJ9 500 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 DHRS1Q96LJ7 313 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 PLGRKTQ9HBL7 147 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 PLCXD1Q9NUJ7 323 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 MUTYHQ9UIF7 546 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 DTX4Q9Y2E6 619 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 USP34Q70CQ2 3546 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 SH3D21A4FU49 640 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 TRAPPC13A5PLN9 417 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 SLC22A1O15245 554 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 NID1P14543 1247 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 GABRB1P18505 474 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 TBCEQ15813 527 aaPredicted RBP12.68□□□□□ -0.38
CLK3-203ENST00000454830 CTF1Q16619 201 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 SOWAHCQ53LP3 525 aaPredicted RBP12.68□□□□□ -0.38
CLK3-203ENST00000454830 PLAG1Q6DJT9 500 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 PLXDC1Q8IUK5 500 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 ZNF595Q8IYB9 648 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 CYP4Z2PQ8N1L4 340 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 TBC1D15Q8TC07 691 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 PIGKQ92643 395 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 NDC1Q9BTX1 674 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 NLGN3Q9NZ94 848 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 CLEC2DQ9UHP7 191 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 KLK4Q9Y5K2 254 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 CLCA3PQ9Y6N3 262 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 SPEGQ15772 3267 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 C17orf105B2RV13 164 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 FHL5Q5TD97 284 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms