RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 OTUB2Q96DC9 234 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 NEUROG3Q9Y4Z2 214 aa10.49□□□□□ -0.73
DDR1-240ENST00000454612 CDC14CA4D256 554 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 C4BPBP20851 252 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 DRD5P21918 477 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 ELAVL4P26378 380 aaKnown RBP10.48□□□□□ -0.73
DDR1-240ENST00000454612 ZNF77Q15935 545 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 IGSF11Q5DX21 431 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 IRAK1BP1Q5VVH5 260 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 USP53Q70EK8 1073 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 PRICKLE2Q7Z3G6 844 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 ZNF431Q8TF32 576 aaPredicted RBP10.48□□□□□ -0.73
DDR1-240ENST00000454612 PDXPQ96GD0 296 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 LYSMD1Q96S90 227 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 SLC22A4Q9H015 551 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 RETREG1Q9H6L5 497 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 TMEM27Q9HBJ8 222 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 FGF22Q9HCT0 170 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 PNO1Q9NRX1 252 aaKnown RBP10.48□□□□□ -0.73
DDR1-240ENST00000454612 MYEF2Q9P2K5 600 aaKnown RBP10.48□□□□□ -0.73
DDR1-240ENST00000454612 ATXN7L1Q9ULK2 861 aaPredicted RBP10.48□□□□□ -0.73
DDR1-240ENST00000454612 PLXNA3P51805 1871 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 LOC102723532A0A0G2JNH3 316 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 LINC01553A4QN01 128 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 FAM86C2PA6NEL3 165 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 HOXC11O43248 304 aaPredicted RBP10.48□□□□□ -0.73
DDR1-240ENST00000454612 HPGDSO60760 199 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 KLHL18O94889 574 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 DDX6P26196 483 aaKnown RBP eCLIP10.48□□□□□ -0.734e-7■■□□□ 13.4
DDR1-240ENST00000454612 ZNF81P51508 661 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 CLVS2Q5SYC1 327 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 KIAA1211LQ6NV74 962 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 METTL2BQ6P1Q9 378 aaKnown RBP10.48□□□□□ -0.73
DDR1-240ENST00000454612 SLC46A3Q7Z3Q1 461 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 ZER1Q7Z7L7 766 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 Q8N402 240 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 DENND6BQ8NEG7 585 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 ZNF563Q8TA94 476 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 DYNC2LI1Q8TCX1 351 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 ZMYND19Q96E35 227 aaPredicted RBP10.48□□□□□ -0.73
DDR1-240ENST00000454612 CRELD1Q96HD1 420 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 MYNNQ9NPC7 610 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 AKIP1Q9NQ31 210 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 CYP8B1Q9UNU6 501 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 A0A1W2PR48 441 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 LRRN3E7EW58 273 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 HMGN4O00479 90 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 HIST1H1TP22492 207 aaPredicted RBP10.48□□□□□ -0.73
DDR1-240ENST00000454612 PSMB10P40306 273 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 CSNK1G2P78368 415 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 PRDX1Q06830 199 aaKnown RBP10.48□□□□□ -0.73
DDR1-240ENST00000454612 POU4F3Q15319 338 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 ZNF181Q2M3W8 571 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 FAM27D1Q5T7N8 215 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 ZNF613Q6PF04 617 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 PRR22Q8IZ63 422 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 BBS1Q8NFJ9 593 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 PJA1Q8NG27 643 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 OR4K14Q8NGD5 310 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 OR52E4Q8NGH9 312 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 TMEM255BQ8WV15 326 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 PEX11GQ96HA9 241 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 MRGPRX3Q96LB0 322 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 DHRS9Q9BPW9 319 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 DPCDQ9BVM2 203 aaPredicted RBP10.48□□□□□ -0.73
DDR1-240ENST00000454612 HOXD1Q9GZZ0 328 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 LRRN3Q9H3W5 708 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 SRA1Q9HD15 236 aaKnown RBP10.48□□□□□ -0.73
DDR1-240ENST00000454612 PFDN2Q9UHV9 154 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 MUTYHQ9UIF7 546 aa10.48□□□□□ -0.73
DDR1-240ENST00000454612 VEGFDO43915 354 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 MPZL2O60487 215 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 UGDHO60701 494 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 APOC3P02656 99 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 FBXO45P0C2W1 286 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 APEHP13798 732 aaKnown RBP10.47□□□□□ -0.73
DDR1-240ENST00000454612 PTPN6P29350 595 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 MAZP56270 477 aaKnown RBP10.47□□□□□ -0.73
DDR1-240ENST00000454612 MAT1AQ00266 395 aaKnown RBP10.47□□□□□ -0.73
DDR1-240ENST00000454612 TFF2Q03403 129 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 BIKQ13323 160 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 SQSTM1Q13501 440 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 GNA13Q14344 377 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 ZNHIT3Q15649 155 aaPredicted RBP10.47□□□□□ -0.73
DDR1-240ENST00000454612 TRMT12Q53H54 448 aaKnown RBP10.47□□□□□ -0.73
DDR1-240ENST00000454612 C9orf50Q5SZB4 431 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 FAM205BPQ63HN1 556 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 RPTNQ6XPR3 784 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 ZNF438Q7Z4V0 828 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 LYSMD2Q8IV50 215 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 ADGRF3Q8IZF5 1079 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 SLC37A3Q8NCC5 494 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 APH1BQ8WW43 257 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 NKD1Q969G9 470 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 MS4A8Q9BY19 250 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 PLA2G12AQ9BZM1 189 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 SLA2Q9H6Q3 261 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 FANCFQ9NPI8 374 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 CD93Q9NPY3 652 aa10.47□□□□□ -0.73
DDR1-240ENST00000454612 EXTL2Q9UBQ6 330 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms