RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 IL33O95760 270 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 AGR2O95994 175 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 SEMG1P04279 462 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 CYP4B1P13584 511 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 EIF2S3P41091 472 aaKnown RBP10.1□□□□□ -0.79
SCN9A-205ENST00000454569 OR1E2P47887 323 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 ANXA11P50995 505 aaKnown RBP10.1□□□□□ -0.79
SCN9A-205ENST00000454569 FBXW4P57775 412 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 SELENOWP63302 87 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 KCNJ10P78508 379 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 GRAMD1BQ3KR37 738 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 IQCCQ4KMZ1 466 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 H3F3CQ6NXT2 135 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 EIF3MQ7L2H7 374 aaKnown RBP10.1□□□□□ -0.79
SCN9A-205ENST00000454569 AQP12AQ8IXF9 295 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 METTL25Q8N6Q8 603 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 TNIP2Q8NFZ5 429 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 OR52E4Q8NGH9 312 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 OR8K3Q8NH51 312 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 BBS10Q8TAM1 723 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 APOBEC4Q8WW27 367 aaKnown RBP10.1□□□□□ -0.79
SCN9A-205ENST00000454569 KCNE4Q8WWG9 221 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 GATA6Q92908 595 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 TP53INP1Q96A56 240 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 RSRC1Q96IZ7 334 aaKnown RBP10.1□□□□□ -0.79
SCN9A-205ENST00000454569 THOC3Q96J01 351 aaKnown RBP10.1□□□□□ -0.79
SCN9A-205ENST00000454569 HSH2DQ96JZ2 352 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 LRGUKQ96M69 825 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 RASL10BQ96S79 203 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 TRIM15Q9C019 465 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 THUMPD1Q9NXG2 353 aaKnown RBP10.1□□□□□ -0.79
SCN9A-205ENST00000454569 NPFFR2Q9Y5X5 522 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 ZZEF1O43149 2961 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 MED19A0JLT2 244 aaPredicted RBP10.09□□□□□ -0.79
SCN9A-205ENST00000454569 AGAP5A6NIR3 686 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 B4DXG7 233 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 OIP5O43482 229 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 FRS3O43559 492 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 ADAM11O75078 769 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 ICOSLGO75144 302 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 SEMA7AO75326 666 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 ITGA10O75578 1167 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 DNAJB5O75953 348 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 OR6B1O95007 311 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 SERPINA7P05543 415 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 PABPC4LP0CB38 370 aaKnown RBP10.09□□□□□ -0.79
SCN9A-205ENST00000454569 RPS4Y1P22090 263 aaKnown RBP10.09□□□□□ -0.79
SCN9A-205ENST00000454569 SOX3P41225 446 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 KCNJ5P48544 419 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 DCAF7P61962 342 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 TXNL4AP83876 142 aaKnown RBP10.09□□□□□ -0.79
SCN9A-205ENST00000454569 PLCXD2Q0VAA5 305 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 RAPSNQ13702 412 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 NDUFAF6Q330K2 333 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 FLYWCH1Q4VC44 716 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 PDZK1Q5T2W1 519 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 BICRALQ6AI39 1079 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 ZNF836Q6ZNA1 936 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 PATL1Q86TB9 770 aaKnown RBP10.09□□□□□ -0.79
SCN9A-205ENST00000454569 TSPYL5Q86VY4 417 aaPredicted RBP10.09□□□□□ -0.79
SCN9A-205ENST00000454569 ARMC8Q8IUR7 673 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 SLC34A3Q8N130 599 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 LILRA2Q8N149 483 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 ZNF619Q8N2I2 560 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 C17orf47Q8NEP4 570 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 OR5M3Q8NGP4 307 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 OR52P1PQ8NH57 321 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 SNIP1Q8TAD8 396 aaKnown RBP10.09□□□□□ -0.79
SCN9A-205ENST00000454569 DIO2Q92813 273 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 NACC2Q96BF6 587 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 ZNF524Q96C55 264 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 HSPBAP1Q96EW2 488 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 PYURFQ96I23 114 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 NODALQ96S42 347 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 MTHFD2LQ9H903 347 aaPredicted RBP10.09□□□□□ -0.79
SCN9A-205ENST00000454569 S100A14Q9HCY8 104 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 OLAHQ9NV23 265 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 STX18Q9P2W9 335 aaKnown RBP10.09□□□□□ -0.79
SCN9A-205ENST00000454569 ANGPTL2Q9UKU9 493 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 AURKCQ9UQB9 309 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 PCDHGB3Q9Y5G1 929 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 HRH3Q9Y5N1 445 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 ATMQ13315 3056 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 DHRS12A0PJE2 317 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 TMEM247A6NEH6 219 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 TTC36A6NLP5 189 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 TAF4O00268 1085 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 TPST2O60704 377 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 TIPRLO75663 272 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 DIRAS1O95057 198 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 UTS2O95399 124 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 F10P00742 488 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 FESP07332 822 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 ETS2P15036 469 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 DCTP40126 519 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 SESN3P58005 492 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 MLF1P58340 268 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 EEF1A1P68104 462 aaKnown RBP10.09□□□□□ -0.79
SCN9A-205ENST00000454569 VLDLRP98155 873 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 HOXC5Q00444 222 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms