RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 PDE9AO76083 593 aa25.52■■□□□ 1.68
SMARCC1-203ENST00000454240 GDF1P27539 372 aa25.52■■□□□ 1.68
SMARCC1-203ENST00000454240 ADSLP30566 484 aaPredicted RBP25.52■■□□□ 1.68
SMARCC1-203ENST00000454240 ANXA11P50995 505 aaKnown RBP25.52■■□□□ 1.68
SMARCC1-203ENST00000454240 KLF10Q13118 480 aa25.52■■□□□ 1.68
SMARCC1-203ENST00000454240 ATAD3BQ5T9A4 648 aa25.52■■□□□ 1.68
SMARCC1-203ENST00000454240 MSRB3Q8IXL7 192 aa25.52■■□□□ 1.68
SMARCC1-203ENST00000454240 AURKBQ96GD4 344 aaPredicted RBP25.52■■□□□ 1.68
SMARCC1-203ENST00000454240 TBL1XR1Q9BZK7 514 aa25.52■■□□□ 1.68
SMARCC1-203ENST00000454240 HOXD1Q9GZZ0 328 aa25.52■■□□□ 1.68
SMARCC1-203ENST00000454240 NSRP1Q9H0G5 558 aaKnown RBP25.52■■□□□ 1.68
SMARCC1-203ENST00000454240 LIPGQ9Y5X9 500 aa25.52■■□□□ 1.68
SMARCC1-203ENST00000454240 HELZ2Q9BYK8 2649 aaKnown RBP25.52■■□□□ 1.68
SMARCC1-203ENST00000454240 FASNP49327 2511 aaKnown RBP25.52■■□□□ 1.68
SMARCC1-203ENST00000454240 A0A1B0GVC2 190 aa25.51■■□□□ 1.67
SMARCC1-203ENST00000454240 PRAMEF27A3QJZ7 478 aa25.51■■□□□ 1.67
SMARCC1-203ENST00000454240 B4DXG7 233 aa25.51■■□□□ 1.67
SMARCC1-203ENST00000454240 NPIPB9F8W1W9 429 aa25.51■■□□□ 1.67
SMARCC1-203ENST00000454240 GUSBP08236 651 aa25.51■■□□□ 1.67
SMARCC1-203ENST00000454240 RBPJQ06330 500 aa25.51■■□□□ 1.67
SMARCC1-203ENST00000454240 FUT5Q11128 374 aa25.51■■□□□ 1.67
SMARCC1-203ENST00000454240 TRILQ7L0X0 811 aa25.51■■□□□ 1.67
SMARCC1-203ENST00000454240 C16orf62Q7Z3J2 963 aa25.51■■□□□ 1.67
SMARCC1-203ENST00000454240 FGD2Q7Z6J4 655 aa25.51■■□□□ 1.67
SMARCC1-203ENST00000454240 CPLX4Q7Z7G2 160 aa25.51■■□□□ 1.67
SMARCC1-203ENST00000454240 NMUR2Q9GZQ4 415 aa25.51■■□□□ 1.67
SMARCC1-203ENST00000454240 ZNF350Q9GZX5 532 aa25.51■■□□□ 1.67
SMARCC1-203ENST00000454240 ZNF835Q9Y2P0 537 aa25.51■■□□□ 1.67
SMARCC1-203ENST00000454240 TRBV5-3A0A0A0MS03 114 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 A0A1B0GTH9 108 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 C17orf51A8MQB3 221 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 CLIC1O00299 241 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 SUSD5O60279 629 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 SNX3O60493 162 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 FCMRO60667 390 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 STX11O75558 287 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 ANGPTL1O95841 491 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 HPNP05981 417 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 ATP12AP54707 1039 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 KCNC4Q03721 635 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 C17orf67Q0P5P2 114 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 FLYWCH1Q4VC44 716 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 DDX59Q5T1V6 619 aaKnown RBP eCLIP25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 OR5M10Q6IEU7 315 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 DLEU7Q6UYE1 221 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 RETREG3Q86VR2 466 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 DPP10Q8N608 796 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 FADS6Q8N9I5 356 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 PRR7Q8TB68 274 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 DUSP19Q8WTR2 217 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 ROPN1LQ96C74 230 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 FAM107BQ9H098 131 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 VAPAQ9P0L0 249 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 PPP4R1LQ9P1A2 415 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 GMEB1Q9Y692 573 aa25.5■■□□□ 1.67
SMARCC1-203ENST00000454240 A0A1W2PQD3 144 aa25.49■■□□□ 1.67
SMARCC1-203ENST00000454240 SCDO00767 359 aa25.49■■□□□ 1.67
SMARCC1-203ENST00000454240 ANGPT2O15123 496 aa25.49■■□□□ 1.67
SMARCC1-203ENST00000454240 HCN1O60741 890 aa25.49■■□□□ 1.67
SMARCC1-203ENST00000454240 ZIC2O95409 532 aaPredicted RBP25.49■■□□□ 1.67
SMARCC1-203ENST00000454240 DCTP40126 519 aa25.49■■□□□ 1.67
SMARCC1-203ENST00000454240 KLHL26Q53HC5 615 aa25.49■■□□□ 1.67
SMARCC1-203ENST00000454240 ARHGAP11AQ6P4F7 1023 aa25.49■■□□□ 1.67
SMARCC1-203ENST00000454240 SPPL2CQ8IUH8 684 aa25.49■■□□□ 1.67
SMARCC1-203ENST00000454240 SAP130Q9H0E3 1048 aa25.49■■□□□ 1.67
SMARCC1-203ENST00000454240 POLE3Q9NRF9 147 aa25.49■■□□□ 1.67
SMARCC1-203ENST00000454240 FBXL2Q9UKC9 423 aa25.49■■□□□ 1.67
SMARCC1-203ENST00000454240 LIPT1Q9Y234 373 aa25.49■■□□□ 1.67
SMARCC1-203ENST00000454240 OSGIN2Q9Y236 505 aa25.49■■□□□ 1.67
SMARCC1-203ENST00000454240 IGLV3-32A0A0A0MS00 114 aa25.48■■□□□ 1.67
SMARCC1-203ENST00000454240 TRGV5A0A0B4J1U4 118 aa25.48■■□□□ 1.67
SMARCC1-203ENST00000454240 NPIPA5A0A0B4J1W7 369 aa25.48■■□□□ 1.67
SMARCC1-203ENST00000454240 NPIPA7E9PJI5 369 aa25.48■■□□□ 1.67
SMARCC1-203ENST00000454240 SLC22A2O15244 555 aa25.48■■□□□ 1.67
SMARCC1-203ENST00000454240 ZNHIT1O43257 154 aa25.48■■□□□ 1.67
SMARCC1-203ENST00000454240 NDUFB5O43674 189 aa25.48■■□□□ 1.67
SMARCC1-203ENST00000454240 SLC19A2O60779 497 aa25.48■■□□□ 1.67
SMARCC1-203ENST00000454240 TRAPPC6AO75865 159 aa25.48■■□□□ 1.67
SMARCC1-203ENST00000454240 STSP08842 583 aa25.48■■□□□ 1.67
SMARCC1-203ENST00000454240 NPIPA8P0DM63 369 aa25.48■■□□□ 1.67
SMARCC1-203ENST00000454240 ETFAP13804 333 aa25.48■■□□□ 1.67
SMARCC1-203ENST00000454240 HPGDP15428 266 aa25.48■■□□□ 1.67
SMARCC1-203ENST00000454240 ZNF800Q2TB10 664 aaPredicted RBP eCLIP25.48■■□□□ 1.673e-11■■□□□ 14.1
SMARCC1-203ENST00000454240 Q6ZPB1 254 aaPredicted RBP25.48■■□□□ 1.67
SMARCC1-203ENST00000454240 OLIG3Q7RTU3 272 aa25.48■■□□□ 1.67
SMARCC1-203ENST00000454240 ZNF527Q8NB42 609 aa25.48■■□□□ 1.67
SMARCC1-203ENST00000454240 OR2M3Q8NG83 312 aa25.48■■□□□ 1.67
SMARCC1-203ENST00000454240 LDAHQ9H6V9 325 aa25.48■■□□□ 1.67
SMARCC1-203ENST00000454240 GCN1Q92616 2671 aaKnown RBP25.48■■□□□ 1.67
SMARCC1-203ENST00000454240 CCDC22O60826 627 aa25.47■■□□□ 1.67
SMARCC1-203ENST00000454240 CRATP43155 626 aa25.47■■□□□ 1.67
SMARCC1-203ENST00000454240 STX5Q13190 355 aa25.47■■□□□ 1.67
SMARCC1-203ENST00000454240 RGNQ15493 299 aa25.47■■□□□ 1.67
SMARCC1-203ENST00000454240 GPR68Q15743 365 aa25.47■■□□□ 1.67
SMARCC1-203ENST00000454240 TYW3Q6IPR3 259 aaKnown RBP25.47■■□□□ 1.67
SMARCC1-203ENST00000454240 TRNT1Q96Q11 434 aaKnown RBP25.47■■□□□ 1.67
SMARCC1-203ENST00000454240 DSN1Q9H410 356 aa25.47■■□□□ 1.67
SMARCC1-203ENST00000454240 RAD21L1Q9H4I0 556 aa25.47■■□□□ 1.67
SMARCC1-203ENST00000454240 HHATLQ9HCP6 504 aa25.47■■□□□ 1.67
SMARCC1-203ENST00000454240 MED11Q9P086 117 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms