RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 IQUBQ8NA54 791 aa1.12□□□□□ -2.23
LRCH3-209ENST00000452660 HEXDCQ8WVB3 486 aa1.12□□□□□ -2.23
LRCH3-209ENST00000452660 NRTNQ99748 197 aa1.12□□□□□ -2.23
LRCH3-209ENST00000452660 POLR3GLQ9BT43 218 aa1.12□□□□□ -2.23
LRCH3-209ENST00000452660 LRRC2Q9BYS8 371 aa1.12□□□□□ -2.23
LRCH3-209ENST00000452660 SLC17A9Q9BYT1 436 aa1.12□□□□□ -2.23
LRCH3-209ENST00000452660 PLA2G12AQ9BZM1 189 aa1.12□□□□□ -2.23
LRCH3-209ENST00000452660 TRIM4Q9C037 500 aa1.12□□□□□ -2.23
LRCH3-209ENST00000452660 GLT8D2Q9H1C3 349 aa1.12□□□□□ -2.23
LRCH3-209ENST00000452660 CLMPQ9H6B4 373 aa1.12□□□□□ -2.23
LRCH3-209ENST00000452660 MRPL17Q9NRX2 175 aaKnown RBP1.12□□□□□ -2.23
LRCH3-209ENST00000452660 CCL27Q9Y4X3 112 aa1.12□□□□□ -2.23
LRCH3-209ENST00000452660 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.12□□□□□ -2.23
LRCH3-209ENST00000452660 PTPRSQ13332 1948 aa1.12□□□□□ -2.23
LRCH3-209ENST00000452660 NCAPD2Q15021 1401 aa1.12□□□□□ -2.23
LRCH3-209ENST00000452660 CABIN1Q9Y6J0 2220 aa1.12□□□□□ -2.23
LRCH3-209ENST00000452660 A0A1B0GUL6 1792 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 RFX7Q2KHR2 1363 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 KTN1Q86UP2 1357 aaKnown RBP1.11□□□□□ -2.23
LRCH3-209ENST00000452660 COL5A1P20908 1838 aaPredicted RBP1.11□□□□□ -2.23
LRCH3-209ENST00000452660 PSME4Q14997 1843 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 A0A0A6YYD4 124 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 CLRN2A0PK11 232 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 A8MXE2 369 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 DLGAP1O14490 977 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 MMP23AO75900 390 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 BBOX1O75936 387 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 SIX3O95343 332 aaPredicted RBP1.11□□□□□ -2.23
LRCH3-209ENST00000452660 IGKV1-17P01599 117 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 IL2RGP31785 369 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 UGT1A3P35503 534 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 MTIF2P46199 727 aaKnown RBP1.11□□□□□ -2.23
LRCH3-209ENST00000452660 NPBWR1P48145 328 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 SIGLEC14Q08ET2 396 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 VGLL4Q14135 290 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 HERPUD1Q15011 391 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 OR1C1Q15619 314 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 NHSL2Q5HYW2 709 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 FAM91A1Q658Y4 838 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 ASPHD2Q6ICH7 369 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 IL34Q6ZMJ4 242 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 Q6ZRG5 221 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 GPR142Q7Z601 462 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 KRTAP13-1Q8IUC0 172 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 LAX1Q8IWV1 398 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 CCDC197Q8NCU1 140 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 BLOC1S5Q8TDH9 187 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 BIRC7Q96CA5 298 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 PCED1BQ96HM7 432 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 S1PR3Q99500 378 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 NUSAP1Q9BXS6 441 aaKnown RBP1.11□□□□□ -2.23
LRCH3-209ENST00000452660 VCXQ9H320 206 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 Q9H3A6 140 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 SLCO1C1Q9NYB5 712 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 ZNF221Q9UK13 617 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 TMED7Q9Y3B3 224 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 WSB1Q9Y6I7 421 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 CSMD2Q7Z408 3487 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 ABCC4O15439 1325 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 F8P00451 2351 aa1.11□□□□□ -2.23
LRCH3-209ENST00000452660 RYR2Q92736 4967 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 BSNQ9UPA5 3926 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 CELSR1Q9NYQ6 3014 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 UTP20O75691 2785 aaKnown RBP1.1□□□□□ -2.23
LRCH3-209ENST00000452660 SDK1Q7Z5N4 2213 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 NPIPA5A0A0B4J1W7 369 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 TMEM110-MUSTN1A8MSY1 372 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 MEI4A8MW99 385 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 NPIPA5E9PKD4 350 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 OR7A17O14581 309 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 MBTPS2O43462 519 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 HTATSF1O43719 755 aaKnown RBP1.1□□□□□ -2.23
LRCH3-209ENST00000452660 AHCYL1O43865 530 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 TYROBPO43914 113 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 LCMT2O60294 686 aaKnown RBP1.1□□□□□ -2.23
LRCH3-209ENST00000452660 ANXA9O76027 345 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 UFL1O94874 794 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 RPN1P04843 607 aaKnown RBP1.1□□□□□ -2.23
LRCH3-209ENST00000452660 ADRB2P07550 413 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 VIMP08670 466 aaKnown RBP1.1□□□□□ -2.23
LRCH3-209ENST00000452660 TBPP20226 339 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 RPS12P25398 132 aaKnown RBP1.1□□□□□ -2.23
LRCH3-209ENST00000452660 OR1D2P34982 312 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 POU3F4P49335 361 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 SUCLG1P53597 346 aaKnown RBP1.1□□□□□ -2.23
LRCH3-209ENST00000452660 PTENP60484 403 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 P2RY14Q15391 338 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 SHROOM1Q2M3G4 852 aaPredicted RBP1.1□□□□□ -2.23
LRCH3-209ENST00000452660 TOR1AIP1Q5JTV8 583 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 PM20D1Q6GTS8 502 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 TMEM110Q86TL2 294 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 ITIH5Q86UX2 942 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 CCAR2Q8N163 923 aaKnown RBP1.1□□□□□ -2.23
LRCH3-209ENST00000452660 MARCH1Q8TCQ1 289 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 SLC25A38Q96DW6 304 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 RPGRIP1Q96KN7 1286 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 SMIM14Q96QK8 99 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 RASL10BQ96S79 203 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 PLEKHF1Q96S99 279 aa1.1□□□□□ -2.23
LRCH3-209ENST00000452660 NICN1Q9BSH3 213 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms