RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 OR5D16Q8NGK9 328 aa18.18■□□□□ 0.5
COL9A3-202ENST00000452372 VPS33AQ96AX1 596 aa18.18■□□□□ 0.5
COL9A3-202ENST00000452372 SLC35A5Q9BS91 424 aa18.18■□□□□ 0.5
COL9A3-202ENST00000452372 LDAHQ9H6V9 325 aa18.18■□□□□ 0.5
COL9A3-202ENST00000452372 RMND5AQ9H871 391 aa18.18■□□□□ 0.5
COL9A3-202ENST00000452372 SDHAF3Q9NRP4 125 aa18.18■□□□□ 0.5
COL9A3-202ENST00000452372 TRIM33Q9UPN9 1127 aa18.18■□□□□ 0.5
COL9A3-202ENST00000452372 FBN2P35556 2912 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 TRGV5A0A0B4J1U4 118 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 OR14I1A6ND48 311 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 AQP7O14520 342 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 RFXANKO14593 260 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 TRAPPC6AO75865 159 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 GSNP06396 782 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 NCF2P19878 526 aaPredicted RBP18.17■□□□□ 0.5
COL9A3-202ENST00000452372 TBXA2RP21731 343 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 CHI3L1P36222 383 aaPredicted RBP18.17■□□□□ 0.5
COL9A3-202ENST00000452372 CASP6P55212 293 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 RCAN2Q14206 197 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 SQLEQ14534 574 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 C3AR1Q16581 482 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 TIGD2Q4W5G0 525 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 DCST2Q5T1A1 773 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 CCNJQ5T5M9 372 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 METTL21CQ5VZV1 264 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 APOOLQ6UXV4 268 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 ZAR1Q86SH2 424 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 OR4C3Q8NH37 302 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 FAM57AQ8TBR7 257 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 ITLN2Q8WWU7 325 aaPredicted RBP18.17■□□□□ 0.5
COL9A3-202ENST00000452372 ITCHQ96J02 903 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 OR51I1Q9H343 314 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 RABEP2Q9H5N1 569 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 UBQLN4Q9NRR5 601 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 CCDC167Q9P0B6 97 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 NCOA6Q14686 2063 aaPredicted RBP18.17■□□□□ 0.5
COL9A3-202ENST00000452372 DCHS2Q6V1P9 2916 aa18.17■□□□□ 0.5
COL9A3-202ENST00000452372 ALG1L2C9J202 215 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 PRRG2O14669 202 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 SCO2O43819 266 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 AGR2O95994 175 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 ZCCHC18P0CG32 403 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 TRPC1P48995 793 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 OR5M10Q6IEU7 315 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 CGB2Q6NT52 195 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 MARCH3Q86UD3 253 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 DOLPP1Q86YN1 238 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 CHDHQ8NE62 594 aaPredicted RBP18.16■□□□□ 0.5
COL9A3-202ENST00000452372 NEIL3Q8TAT5 605 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 DUSP19Q8WTR2 217 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 PHF12Q96QT6 1004 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 SDF2Q99470 211 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 TMEM120AQ9BXJ8 343 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 TBL1XR1Q9BZK7 514 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 RTN4RQ9BZR6 473 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 EXO5Q9H790 373 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 EXD2Q9NVH0 621 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 PPP4R1LQ9P1A2 415 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 HRH3Q9Y5N1 445 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 PCNX3Q9H6A9 2034 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 PDZD2O15018 2839 aa18.16■□□□□ 0.5
COL9A3-202ENST00000452372 NPIPA2E9PIF3 369 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 NPIPA3F8WFD2 350 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 OXSR1O95747 527 aaPredicted RBP18.15■□□□□ 0.5
COL9A3-202ENST00000452372 AK1P00568 194 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 C1QCP02747 245 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 TPOP07202 933 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 ATP6V1C1P21283 382 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 GRNP28799 593 aaKnown RBP18.15■□□□□ 0.5
COL9A3-202ENST00000452372 CASP9P55211 416 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 C17orf67Q0P5P2 114 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 TOMM20Q15388 145 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 ARHGAP11BQ3KRB8 267 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 AGKQ53H12 422 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 HEPHL1Q6MZM0 1159 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 GTF2H4Q92759 462 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 SARAFQ96BY9 339 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 SPDL1Q96EA4 605 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 DTNBP1Q96EV8 351 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 CCDC120Q96HB5 630 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 ZNF317Q96PQ6 595 aaPredicted RBP18.15■□□□□ 0.5
COL9A3-202ENST00000452372 HOXD1Q9GZZ0 328 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 SLC6A15Q9H2J7 730 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 ZNF385DQ9H6B1 395 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 SLC52A3Q9NQ40 469 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 SLC6A13Q9NSD5 602 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 TINAGQ9UJW2 476 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 FBXL2Q9UKC9 423 aa18.15■□□□□ 0.5
COL9A3-202ENST00000452372 MRPS18CQ9Y3D5 142 aaKnown RBP18.15■□□□□ 0.5
COL9A3-202ENST00000452372 C17orf51A8MQB3 221 aa18.14■□□□□ 0.49
COL9A3-202ENST00000452372 B4DXG7 233 aa18.14■□□□□ 0.49
COL9A3-202ENST00000452372 BCKDKO14874 412 aa18.14■□□□□ 0.49
COL9A3-202ENST00000452372 ANP32DO95626 131 aa18.14■□□□□ 0.49
COL9A3-202ENST00000452372 KRT75O95678 551 aa18.14■□□□□ 0.49
COL9A3-202ENST00000452372 ANGPTL1O95841 491 aa18.14■□□□□ 0.49
COL9A3-202ENST00000452372 OR12D1P0DN82 309 aa18.14■□□□□ 0.49
COL9A3-202ENST00000452372 ENDOUP21128 410 aaKnown RBP18.14■□□□□ 0.49
COL9A3-202ENST00000452372 KHKP50053 298 aa18.14■□□□□ 0.49
COL9A3-202ENST00000452372 ARFIP2P53365 341 aa18.14■□□□□ 0.49
COL9A3-202ENST00000452372 TXNL4AP83876 142 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms