RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 CNOT2Q9NZN8 540 aaKnown RBP9.97□□□□□ -0.81
PKP4-206ENST00000452162 PTGFRNQ9P2B2 879 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 GPR55Q9Y2T6 319 aaPredicted RBP9.97□□□□□ -0.81
PKP4-206ENST00000452162 ACACBO00763 2458 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 DUXAA6NLW8 204 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 M0R082 166 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 CYR61O00622 381 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 DUX1O43812 170 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 GALR3O60755 368 aaPredicted RBP9.97□□□□□ -0.81
PKP4-206ENST00000452162 EIF2S1P05198 315 aaKnown RBP9.97□□□□□ -0.81
PKP4-206ENST00000452162 PROS1P07225 676 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 ACP2P11117 423 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 MMP11P24347 488 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 PRKAR1BP31321 381 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 SLC15A1P46059 708 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 SHC2P98077 582 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 SQSTM1Q13501 440 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 CAMK2BQ13554 666 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 COL9A2Q14055 689 aaPredicted RBP9.97□□□□□ -0.81
PKP4-206ENST00000452162 EXOSC6Q5RKV6 272 aaKnown RBP9.97□□□□□ -0.81
PKP4-206ENST00000452162 TMEM201Q5SNT2 666 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 ZER1Q7Z7L7 766 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 OOSP2Q86WS3 158 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 SLITRK4Q8IW52 837 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 ZNF655Q8N720 491 aaPredicted RBP9.97□□□□□ -0.81
PKP4-206ENST00000452162 CSNK1A1LQ8N752 337 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 TMEM52Q8NDY8 209 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 OR4K5Q8NGD3 323 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 ADAMTS15Q8TE58 950 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 CDS1Q92903 461 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 SLC38A4Q969I6 547 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 COL26A1Q96A83 441 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 SLC25A19Q9HC21 320 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 CLN6Q9NWW5 311 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 POMT2Q9UKY4 750 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 C19orf53Q9UNZ5 99 aaPredicted RBP9.97□□□□□ -0.81
PKP4-206ENST00000452162 ACACAQ13085 2346 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 IGHV5-10-1A0A0J9YXX1 117 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 EFCAB10A6NFE3 127 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 CLDN24A6NM45 220 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 HCRTR1O43613 425 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 FCMRO60667 390 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 TPST2O60704 377 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 AGR2O95994 175 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 ADRA2AP08913 450 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 ADORA3P0DMS8 318 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 PORP16435 677 aaPredicted RBP9.96□□□□□ -0.81
PKP4-206ENST00000452162 CD36P16671 472 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 LIPAP38571 399 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 GFERP55789 205 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 LSM11P83369 360 aaKnown RBP eCLIP9.96□□□□□ -0.813e-6■□□□□ 9.2
PKP4-206ENST00000452162 ZFP36L1Q07352 338 aaKnown RBP9.96□□□□□ -0.81
PKP4-206ENST00000452162 ST3GAL4Q11206 333 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 COX10Q12887 443 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 NDUFA9Q16795 377 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 ZNF829Q3KNS6 432 aaPredicted RBP9.96□□□□□ -0.81
PKP4-206ENST00000452162 C1orf94Q6P1W5 598 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 TMEM71Q6P5X7 295 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 CROCCP3Q8IVE0 287 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 CACTIN-AS1Q8N1I8 211 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 CA13Q8N1Q1 262 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 STX19Q8N4C7 294 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 ARHGEF39Q8N4T4 335 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 RCBTB1Q8NDN9 531 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 OR5T3Q8NGG3 340 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 NDNFQ8TB73 568 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 NR4A3Q92570 626 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 GPA33Q99795 319 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 KLHL3Q9UH77 587 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 MSRB2Q9Y3D2 182 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 DMXL2Q8TDJ6 3036 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 SPTBP11277 2137 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 APC2O95996 2303 aa9.96□□□□□ -0.81
PKP4-206ENST00000452162 A0A1W2PNU3 283 aaPredicted RBP9.96□□□□□ -0.82
PKP4-206ENST00000452162 PMS2P1A4D2B8 440 aa9.96□□□□□ -0.82
PKP4-206ENST00000452162 FRS3O43559 492 aa9.96□□□□□ -0.82
PKP4-206ENST00000452162 FGF17O60258 216 aa9.96□□□□□ -0.82
PKP4-206ENST00000452162 ATP1B1P05026 303 aa9.96□□□□□ -0.82
PKP4-206ENST00000452162 PIPP12273 146 aaPredicted RBP9.96□□□□□ -0.82
PKP4-206ENST00000452162 CAPZBP47756 277 aa9.96□□□□□ -0.82
PKP4-206ENST00000452162 BMXP51813 675 aa9.96□□□□□ -0.82
PKP4-206ENST00000452162 ID2Q02363 134 aa9.96□□□□□ -0.82
PKP4-206ENST00000452162 DUSP5Q16690 384 aa9.96□□□□□ -0.82
PKP4-206ENST00000452162 ARHGAP11BQ3KRB8 267 aa9.96□□□□□ -0.82
PKP4-206ENST00000452162 ENTPD8Q5MY95 495 aa9.96□□□□□ -0.82
PKP4-206ENST00000452162 SNAP47Q5SQN1 464 aa9.96□□□□□ -0.82
PKP4-206ENST00000452162 PHF19Q5T6S3 580 aa9.96□□□□□ -0.82
PKP4-206ENST00000452162 AP1ARQ63HQ0 302 aa9.96□□□□□ -0.82
PKP4-206ENST00000452162 TYW3Q6IPR3 259 aaKnown RBP9.96□□□□□ -0.82
PKP4-206ENST00000452162 WDR74Q6RFH5 385 aaPredicted RBP9.96□□□□□ -0.82
PKP4-206ENST00000452162 ZBTB46Q86UZ6 589 aa9.96□□□□□ -0.82
PKP4-206ENST00000452162 OR52P1PQ8NH57 321 aa9.96□□□□□ -0.82
PKP4-206ENST00000452162 DIO2Q92813 273 aa9.96□□□□□ -0.82
PKP4-206ENST00000452162 PRR14Q9BWN1 585 aa9.96□□□□□ -0.82
PKP4-206ENST00000452162 CDCA4Q9BXL8 241 aa9.96□□□□□ -0.82
PKP4-206ENST00000452162 CTPS2Q9NRF8 586 aa9.96□□□□□ -0.82
PKP4-206ENST00000452162 A0A087WV62 115 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 H3BN98 237 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 ENTPD6O75354 484 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 PTHP01270 115 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms