RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 DUSP19Q8WTR2 217 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 RNF138Q8WVD3 245 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 NRGNQ92686 78 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 INTS12Q96CB8 462 aaKnown RBP8.77□□□□□ -1.01
USP54-207ENST00000451492 MTERF3Q96E29 417 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 DTNBP1Q96EV8 351 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 C20orf27Q9GZN8 174 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 CXorf36Q9H7Y0 433 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 SDHAF3Q9NRP4 125 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 ACSS1Q9NUB1 689 aaPredicted RBP8.77□□□□□ -1.01
USP54-207ENST00000451492 ATAD3AQ9NVI7 634 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 FBXO34Q9NWN3 711 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 FAM120CQ9NX05 1096 aaKnown RBP8.77□□□□□ -1.01
USP54-207ENST00000451492 ATP6V1HQ9UI12 483 aa8.77□□□□□ -1.01
USP54-207ENST00000451492 EIF3LQ9Y262 564 aaKnown RBP8.77□□□□□ -1.01
USP54-207ENST00000451492 HRNRQ86YZ3 2850 aaPredicted RBP8.77□□□□□ -1.01
USP54-207ENST00000451492 OTOGQ6ZRI0 2925 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 MBD3L4A6NDZ8 208 aaPredicted RBP8.76□□□□□ -1.01
USP54-207ENST00000451492 MBD3L3A6NE82 208 aaPredicted RBP8.76□□□□□ -1.01
USP54-207ENST00000451492 MBD3L5A6NJ08 208 aaPredicted RBP8.76□□□□□ -1.01
USP54-207ENST00000451492 CD8B2A6NJW9 211 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 TM9SF1O15321 606 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 NDUFB5O43674 189 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 ZIC3O60481 467 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 KCNK2O95069 426 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 NKX2-2O95096 273 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 KITP10721 976 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 HPGDP15428 266 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 ZNF708P17019 499 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 DDX5P17844 614 aaKnown RBP8.76□□□□□ -1.01
USP54-207ENST00000451492 TIMP3P35625 211 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 CPOXP36551 454 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 CPA2P48052 419 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 PRIM2P49643 509 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 CASP9P55211 416 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 NME5P56597 212 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 CLDN18P56856 261 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 RPS26P62854 115 aaKnown RBP8.76□□□□□ -1.01
USP54-207ENST00000451492 SIRPAP78324 504 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 POU6F2P78424 691 aaPredicted RBP8.76□□□□□ -1.01
USP54-207ENST00000451492 MAD2L1Q13257 205 aaPredicted RBP8.76□□□□□ -1.01
USP54-207ENST00000451492 STX3Q13277 289 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 MPP2Q14168 576 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 OR4F3Q6IEY1 312 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 ARSKQ6UWY0 536 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 CHMP1BQ7LBR1 199 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 CDH24Q86UP0 819 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 CLECL1Q8IZS7 167 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 CLEC4FQ8N1N0 589 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 ZNF614Q8N883 585 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 FADS6Q8N9I5 356 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 OR5D16Q8NGK9 328 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 OR6Y1Q8NGX8 325 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 MBD3L2Q8NHZ7 208 aaPredicted RBP8.76□□□□□ -1.01
USP54-207ENST00000451492 ZPLD1Q8TCW7 415 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 C1GALT1C1Q96EU7 318 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 C14orf79Q96F83 325 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 LRRC46Q96FV0 321 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 ZNF764Q96H86 408 aaPredicted RBP8.76□□□□□ -1.01
USP54-207ENST00000451492 SORT1Q99523 831 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 SH3GL2Q99962 352 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 G6PC3Q9BUM1 346 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 DUSP26Q9BV47 211 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 NUF2Q9BZD4 464 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 PTGES2Q9H7Z7 377 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 AKTIPQ9H8T0 292 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 MCCC2Q9HCC0 563 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 SSU72Q9NP77 194 aaKnown RBP8.76□□□□□ -1.01
USP54-207ENST00000451492 PNPOQ9NVS9 261 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 NOP53Q9NZM5 478 aaKnown RBP8.76□□□□□ -1.01
USP54-207ENST00000451492 MARCOQ9UEW3 520 aaPredicted RBP8.76□□□□□ -1.01
USP54-207ENST00000451492 RAP2CQ9Y3L5 183 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 ZNF337Q9Y3M9 751 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 L3MBTL1Q9Y468 752 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 CELSR1Q9NYQ6 3014 aa8.76□□□□□ -1.01
USP54-207ENST00000451492 ANKRD17O75179 2603 aaKnown RBP8.75□□□□□ -1.01
USP54-207ENST00000451492 OR2M5A3KFT3 312 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 TTC36A6NLP5 189 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 C9JVG2 144 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 SCDO00767 359 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 BIRC5O15392 142 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 SMNDC1O75940 238 aaKnown RBP eCLIP8.75□□□□□ -1.01
USP54-207ENST00000451492 TGM6O95932 706 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 OPN1LWP04000 364 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 IFI6P09912 130 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 CPN1P15169 458 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 ATP6V1C1P21283 382 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 CHMP24386 653 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 CTSSP25774 331 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 KIR2DL3P43628 341 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 CCT3P49368 545 aaKnown RBP8.75□□□□□ -1.01
USP54-207ENST00000451492 RPL14P50914 215 aaKnown RBP8.75□□□□□ -1.01
USP54-207ENST00000451492 DIO3P55073 304 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 B3GALT5-AS1P59052 145 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 BST1Q10588 318 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 GANABQ14697 944 aaKnown RBP8.75□□□□□ -1.01
USP54-207ENST00000451492 DCST2Q5T1A1 773 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 FBXW10Q5XX13 1052 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 CDC73Q6P1J9 531 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 POMZP3Q6PJE2 187 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms