RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 S1PR1P21453 382 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 MC3RP41968 323 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 CDKN2CP42773 168 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 ANXA11P50995 505 aaKnown RBP15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 FBXW4P57775 412 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 MGAT2Q10469 447 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 SLC10A1Q14973 349 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 NNATQ16517 81 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 GXYLT1Q4G148 440 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 DNAJC14Q6Y2X3 702 aaPredicted RBP15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 TRILQ7L0X0 811 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 ARPINQ7Z6K5 226 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 TAGAPQ8N103 731 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 FBXW8Q8N3Y1 598 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 NUP43Q8NFH3 380 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 PHF10Q8WUB8 498 aaKnown RBP15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 ADIPOR1Q96A54 375 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 TP53INP1Q96A56 240 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 LRRC58Q96CX6 371 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 CGREF1Q99674 301 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 THTPAQ9BU02 230 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 DENND2DQ9H6A0 471 aaPredicted RBP15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 LDAHQ9H6V9 325 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 EXO5Q9H790 373 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 CXorf36Q9H7Y0 433 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 SIRT3Q9NTG7 399 aaPredicted RBP15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 PRODH2Q9UF12 536 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 CNOT11Q9UKZ1 510 aaKnown RBP15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 C19orf53Q9UNZ5 99 aaPredicted RBP15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 DTX4Q9Y2E6 619 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 AP3M1Q9Y2T2 418 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 PCDHB14Q9Y5E9 798 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 NPFFR2Q9Y5X5 522 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 EXPH5Q8NEV8 1989 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 RNF103-CHMP3A0A140T963 221 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 MAN2A2P49641 1150 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 PRIM2P49643 509 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 PRKAG1P54619 331 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 MRPS35P82673 323 aaKnown RBP15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 TXNL4AP83876 142 aaKnown RBP15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 DUSP8Q13202 625 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 TP53BP2Q13625 1128 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 NTRK2Q16620 822 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 HYAL4Q2M3T9 481 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 TRMT12Q53H54 448 aaKnown RBP15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 SWT1Q5T5J6 900 aaKnown RBP15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 BICRALQ6AI39 1079 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 ZNF585AQ6P3V2 769 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 DLEU7Q6UYE1 221 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 MCEMP1Q8IX19 187 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 ULK2Q8IYT8 1036 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 EID3Q8N140 333 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 OR2L13Q8N349 312 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 OR7G2Q8NG99 324 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 DIO2Q92813 273 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 FAM120BQ96EK7 910 aaKnown RBP15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 TP63Q9H3D4 680 aaPredicted RBP15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 CHST11Q9NPF2 352 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 CNIH4Q9P003 139 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 NTMQ9P121 344 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 STOML1Q9UBI4 398 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 ZNF639Q9UID6 485 aa15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 PHF3Q92576 2039 aaKnown RBP15.6■□□□□ 0.09
PRPF40A-204ENST00000450303 PKDREJQ9NTG1 2253 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 LRRC3CA6NJW4 275 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 TTC36A6NLP5 189 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 CLIC1O00299 241 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 SOX30O94993 753 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 IGHG3P01860 377 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 COX6B1P14854 86 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 SOX18P35713 384 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 MAGEA8P43361 318 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 RUNDC3AQ59EK9 446 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 C1orf146Q5VVC0 180 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 DESI1Q6ICB0 168 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 TMEM211Q6ICI0 200 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 ZCCHC12Q6PEW1 402 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 ANGPTL8Q6UXH0 198 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 C6orf120Q7Z4R8 191 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 DND1Q8IYX4 353 aaKnown RBP15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 OR52R1Q8NGF1 315 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 OR5AK3PQ8NH89 298 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 ZFP90Q8TF47 636 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 SLC35G5Q96KT7 338 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 MS4A4EQ96PG1 132 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 DOHHQ9BU89 302 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 ITPAQ9BY32 194 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 NXF5Q9H1B4 397 aaKnown RBP15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 ANKRA2Q9H9E1 313 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 TPT1P8Q9HAU6 139 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 ZFP64Q9NPA5 681 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 COQ3Q9NZJ6 369 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 VAPAQ9P0L0 249 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 SLAMF8Q9P0V8 285 aa15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 PRPF19Q9UMS4 504 aaKnown RBP15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 BOKQ9UMX3 212 aaPredicted RBP15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 FAF1Q9UNN5 650 aaPredicted RBP15.59■□□□□ 0.09
PRPF40A-204ENST00000450303 TRGV5A0A0B4J1U4 118 aa15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 A0A1B0GVC2 190 aa15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 UPK1AO00322 258 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms