RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 RBM22Q9NW64 420 aaKnown RBP eCLIP2.09□□□□□ -2.08
USP53-202ENST00000450251 GPATCH2LQ9NWQ4 482 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 PARPBPQ9NWS1 579 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 ZNF586Q9NXT0 402 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 BET1LQ9NYM9 111 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 SUSD2Q9UGT4 822 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 TSPAN16Q9UKR8 245 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 PCDHB10Q9UN67 800 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 EXO1Q9UQ84 846 aaKnown RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 MMP24Q9Y5R2 645 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 NPFFR2Q9Y5X5 522 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 AUP1Q9Y679 476 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 COL1A1P02452 1464 aaPredicted RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 SPATA31A1Q5TZJ5 1347 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 SLC22A23A1A5C7 686 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 LACTBL1A8MY62 500 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 GABARAPH6UMI1 98 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 GPR171O14626 319 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 CTDSPLO15194 276 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 HCRTR2O43614 444 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 GSTZ1O43708 216 aaPredicted RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 JTBO76095 146 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 CATP04040 527 aaKnown RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 CALCBP10092 127 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 MYOGP15173 224 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 ZNF44P15621 663 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 ENGP17813 658 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 EPHA1P21709 976 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 TUBG1P23258 451 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 BDKRB2P30411 391 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 HOXA13P31271 388 aaPredicted RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 CSF2RBP32927 897 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 SOX18P35713 384 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 GUCA1AP43080 201 aaPredicted RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 OR3A2P47893 321 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 PSEN2P49810 448 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 SRPXP78539 464 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 PNRC1Q12796 327 aaPredicted RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 HYAL2Q12891 473 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 ECH1Q13011 328 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 SCARF1Q14162 830 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 PAFAH1B3Q15102 231 aaKnown RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 GFOD2Q3B7J2 385 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 CRY2Q49AN0 593 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 SOHLH1Q5JUK2 328 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 LIPNQ5VXI9 398 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 XAF1Q6GPH4 301 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 FRRS1Q6ZNA5 592 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 PLEKHH3Q7Z736 793 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 TMEM86AQ8N2M4 240 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 CCDC71LQ8N9Z2 235 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 TMEM104Q8NE00 496 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 CCDC54Q8NEL0 328 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 OR6T1Q8NGN1 323 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 OR9I1Q8NGQ6 314 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 UBA3Q8TBC4 463 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 DTD1Q8TEA8 209 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 METTL21AQ8WXB1 218 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 HAS2Q92819 552 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 RELTQ969Z4 430 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 BORCS7Q96B45 105 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 LENG9Q96B70 501 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 LRFN3Q9BTN0 628 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 SAMD10Q9BYL1 202 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 KATNBL1Q9H079 304 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 TLR9Q9NR96 1032 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 PLSCR3Q9NRY6 295 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 THSD1Q9NS62 852 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 RXFP3Q9NSD7 469 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 GDF2Q9UK05 429 aaPredicted RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 ADAM29Q9UKF5 820 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 RNF150Q9ULK6 438 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 WASF3Q9UPY6 502 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 TNFSF13BQ9Y275 285 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 ASB1Q9Y576 335 aa2.09□□□□□ -2.08
USP53-202ENST00000450251 ZNFX1Q9P2E3 1918 aaKnown RBP2.09□□□□□ -2.08
USP53-202ENST00000450251 RGPD8O14715 1765 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 RGPD5Q99666 1765 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 A0A1W2PQ67 120 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 A6NDN8 102 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TMEM235A6NFC5 223 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ANKRD61A6NGH8 418 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 A6NIZ1 184 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ELOA3DA6NLF2 546 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 ERVH48-1M5A8F1 160 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 NFKBIEO00221 500 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OR1I1O60431 355 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 EIF1BO60739 113 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 FZD7O75084 574 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CNOT4O95628 575 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 HLA-HP01893 362 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CYP17A1P05093 508 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 GALTP07902 379 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 HTR1AP08908 422 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CT45A8P0DMV1 189 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CT45A9P0DMV2 189 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SPP1P10451 314 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 NDUFB7P17568 137 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TBPP20226 339 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 BMP5P22003 454 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms