RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 GASTP01350 101 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 CCL4P13236 92 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 CYP4B1P13584 511 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 AGXTP21549 392 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 DRD5P21918 477 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 RYKP34925 604 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 CLK3P49761 638 aaKnown RBP13.19□□□□□ -0.3
USP39-207ENST00000450066 TAS2R41P59536 307 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 DCAF7P61962 342 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 FOXD4Q12950 439 aaPredicted RBP13.19□□□□□ -0.3
USP39-207ENST00000450066 NNATQ16517 81 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 KCTD21Q4G0X4 260 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 PODNL1Q6PEZ8 512 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 LANCL3Q6ZV70 420 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 OR1N1Q8NGS0 311 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 DIO2Q92813 273 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 LRFN5Q96NI6 719 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 NUDT9Q9BW91 350 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 YTHDF1Q9BYJ9 559 aaKnown RBP13.19□□□□□ -0.3
USP39-207ENST00000450066 ING2Q9H160 280 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 ANKRD19PQ9H560 264 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 AKAP7Q9P0M2 348 aaPredicted RBP13.19□□□□□ -0.3
USP39-207ENST00000450066 COPS7AQ9UBW8 275 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 ENOPH1Q9UHY7 261 aa13.19□□□□□ -0.3
USP39-207ENST00000450066 NDRG4Q9ULP0 352 aaKnown RBP13.19□□□□□ -0.3
USP39-207ENST00000450066 FRG2CA6NGY1 282 aa13.18□□□□□ -0.3
USP39-207ENST00000450066 B4E171 279 aa13.18□□□□□ -0.3
USP39-207ENST00000450066 CYP7B1O75881 506 aa13.18□□□□□ -0.3
USP39-207ENST00000450066 ADAP00813 363 aa13.18□□□□□ -0.3
USP39-207ENST00000450066 TSPAN7P41732 249 aa13.18□□□□□ -0.3
USP39-207ENST00000450066 ZNF136P52737 540 aa13.18□□□□□ -0.3
USP39-207ENST00000450066 PSMD4P55036 377 aaKnown RBP13.18□□□□□ -0.3
USP39-207ENST00000450066 TPD52P55327 224 aaPredicted RBP13.18□□□□□ -0.3
USP39-207ENST00000450066 ISL1P61371 349 aa13.18□□□□□ -0.3
USP39-207ENST00000450066 ST3GAL3Q11203 375 aa13.18□□□□□ -0.3
USP39-207ENST00000450066 ILKQ13418 452 aa13.18□□□□□ -0.3
USP39-207ENST00000450066 ZNF141Q15928 474 aa13.18□□□□□ -0.3
USP39-207ENST00000450066 ZSWIM7Q19AV6 140 aa13.18□□□□□ -0.3
USP39-207ENST00000450066 ENTPD8Q5MY95 495 aa13.18□□□□□ -0.3
USP39-207ENST00000450066 PDZK1Q5T2W1 519 aa13.18□□□□□ -0.3
USP39-207ENST00000450066 RANBP3LQ86VV4 465 aaPredicted RBP13.18□□□□□ -0.3
USP39-207ENST00000450066 SETD9Q8NE22 299 aa13.18□□□□□ -0.3
USP39-207ENST00000450066 ADIPOR1Q96A54 375 aa13.18□□□□□ -0.3
USP39-207ENST00000450066 LCORQ96JN0 433 aaPredicted RBP13.18□□□□□ -0.3
USP39-207ENST00000450066 MCHR1Q99705 422 aa13.18□□□□□ -0.3
USP39-207ENST00000450066 CMKLR1Q99788 373 aa13.18□□□□□ -0.3
USP39-207ENST00000450066 PRR14Q9BWN1 585 aa13.18□□□□□ -0.3
USP39-207ENST00000450066 POLR2J2Q9GZM3 115 aaKnown RBP13.18□□□□□ -0.3
USP39-207ENST00000450066 POLR2J3Q9H1A7 115 aaKnown RBP13.18□□□□□ -0.3
USP39-207ENST00000450066 MGAT4BQ9UQ53 548 aa13.18□□□□□ -0.3
USP39-207ENST00000450066 HSPE1-MOB4S4R3N1 261 aa13.18□□□□□ -0.3
USP39-207ENST00000450066 OR6C76A6NM76 312 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 CPSF4LA6NMK7 179 aaKnown RBP13.17□□□□□ -0.3
USP39-207ENST00000450066 TNFRSF10AO00220 468 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 OR10H3O60404 316 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 FMO6PO60774 539 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 ALOX12BO75342 701 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 OR5F1O95221 314 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 CYC1P08574 325 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 SMIM18P0DKX4 95 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 EPHA2P29317 976 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 ATP12AP54707 1039 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 RPP38P78345 283 aaKnown RBP13.17□□□□□ -0.3
USP39-207ENST00000450066 HOXC5Q00444 222 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 E2F1Q01094 437 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 RAPSNQ13702 412 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 TRAM2Q15035 370 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 DECR1Q16698 335 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 LCN10Q6JVE6 187 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 MRPL14Q6P1L8 145 aaKnown RBP13.17□□□□□ -0.3
USP39-207ENST00000450066 ANKRD37Q7Z713 158 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 GRAMD2AQ8IUY3 354 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 ADAMTS16Q8TE57 1224 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 METTL21AQ8WXB1 218 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 PITX2Q99697 317 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 CDC6Q99741 560 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 APOL4Q9BPW4 351 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 NXF5Q9H1B4 397 aaKnown RBP13.17□□□□□ -0.3
USP39-207ENST00000450066 WDR54Q9H977 334 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 CTPS2Q9NRF8 586 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 GMPPBQ9Y5P6 360 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 CFAP54Q96N23 3096 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 COL27A1Q8IZC6 1860 aaPredicted RBP13.17□□□□□ -0.3
USP39-207ENST00000450066 C2orf92A0A1B0GVN3 265 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 TRIM64A6NGJ6 449 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 A6NHS1 94 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 CNOT3O75175 753 aaKnown RBP13.17□□□□□ -0.3
USP39-207ENST00000450066 POU2F1P14859 743 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 ZNF28P17035 718 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 GPR143P51810 404 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 EMP2P54851 167 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 FOXL2P58012 376 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 SPEM2Q0P670 501 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 EBPQ15125 230 aaKnown RBP13.17□□□□□ -0.3
USP39-207ENST00000450066 FAAH2Q6GMR7 532 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 PLEKHM3Q6ZWE6 761 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 C9orf40Q8IXQ3 194 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 TOR1AIP2Q8NFQ8 470 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 TSPAN14Q8NG11 270 aa13.17□□□□□ -0.3
USP39-207ENST00000450066 FBLIM1Q8WUP2 373 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms