RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 FAM110BQ8TC76 370 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 CPT1CQ8TCG5 803 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 PAQR8Q8TEZ7 354 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 LIPHQ8WWY8 451 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 PYCR2Q96C36 320 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 COQ8BQ96D53 544 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 RRNAD1Q96FB5 475 aaKnown RBP3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 HMCESQ96FZ2 354 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 MARS2Q96GW9 593 aaKnown RBP3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 CDKN2AIPNLQ96HQ2 116 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 CXorf58Q96LI9 332 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 Q96MT0 163 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC46A1Q96NT5 459 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 NECTIN4Q96NY8 510 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 RNF157Q96PX1 679 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 TEFMQ96QE5 360 aaKnown RBP3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR2M2Q96R28 347 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 TAAR1Q96RJ0 339 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 PCDHB18PQ96TA0 734 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 KLF6Q99612 283 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 PITX2Q99697 317 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 NPAS2Q99743 824 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 HOPXQ9BPY8 73 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 MAPKAP1Q9BPZ7 522 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 ADPGKQ9BRR6 497 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 NDUFAF3Q9BU61 184 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 WRAP53Q9BUR4 548 aaKnown RBP3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 TAPBPLQ9BX59 468 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 BEX2Q9BXY8 128 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC46A2Q9BY10 475 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC29A3Q9BZD2 475 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 NELFAQ9H3P2 528 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 TUBA4BQ9H853 241 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZBTB20Q9HC78 741 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 MRPL47Q9HD33 250 aaKnown RBP3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 CHMP1AQ9HD42 196 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 PARD6AQ9NPB6 346 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC52A3Q9NQ40 469 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 G6PC2Q9NQR9 355 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 DYRK4Q9NR20 520 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 CTPS2Q9NRF8 586 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 CHRAC1Q9NRG0 131 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 AGPAT3Q9NRZ7 376 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 KRT84Q9NSB2 600 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 TAS2R10Q9NYW0 307 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 CLEC2DQ9UHP7 191 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 JAG2Q9Y219 1238 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 RNF6Q9Y252 685 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 TPRKBQ9Y3C4 175 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 ATG4BQ9Y4P1 393 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 POLR3HQ9Y535 204 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 NHSQ6T4R5 1651 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 COL1A2P08123 1366 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 RNF103-CHMP3A0A140T963 221 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 A0A1W2PPH5 198 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 PLSCR5A0PG75 271 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 TBC1D3BA6NDS4 549 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 TBC1D3FA6NER0 549 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 GPR89AB7ZAQ6 455 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 M0R233 179 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 FOXE1O00358 373 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 NME4O00746 187 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 PDXKO00764 312 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 IMPA2O14732 288 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 PRMT5O14744 637 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 LDLRAD4O15165 306 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 SURF4O15260 269 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 INSIG1O15503 277 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 RGS10O43665 173 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 AIREO43918 545 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 ICOSLGO75144 302 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 SEMA7AO75326 666 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF821O75541 412 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 GATBO75879 557 aaKnown RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 PIAS2O75928 621 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR4F21O95013 312 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 PDE8BO95263 885 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 FGF19O95750 216 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 HSPA4LO95757 839 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 C6orf47O95873 294 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 AK1P00568 194 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 IGKV5-2P06315 115 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 MMP10P09238 476 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 SPARCP09486 303 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 CTXN2P0C2S0 81 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 METTL15P1P0C7V9 234 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 GPR89BP0CG08 455 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 MED14OSP0DP75 135 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 RALAP11233 206 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 ODC1P11926 461 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF44P15621 663 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 PVALBP20472 110 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 MAGP20916 626 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 GALP22466 123 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 GADD45AP24522 165 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 KLRK1P26718 216 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 MAPK3P27361 379 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 PSMB6P28072 239 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 ALDH4A1P30038 563 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 PPP2R1BP30154 601 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms