RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 HEPACAM2A8MVW5 462 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 F5H0A9 414 aaPredicted RBP11.66□□□□□ -0.54
UBE3B-204ENST00000449510 GTPBP1O00178 669 aaKnown RBP11.66□□□□□ -0.54
UBE3B-204ENST00000449510 ARL6IP5O75915 188 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 C8AP07357 584 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 GTF2F2P13984 249 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 GABRA5P31644 462 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 BMP8BP34820 402 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 RAB40BQ12829 278 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 ZDHHC20Q5W0Z9 365 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 SLC8B1Q6J4K2 584 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 NDUFAF7Q7L592 441 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 BMP8AQ7Z5Y6 402 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 PAQR7Q86WK9 346 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 PDZD9Q8IXQ8 264 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 NUP43Q8NFH3 380 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 FCAMRQ8WWV6 532 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 HSPA12BQ96MM6 686 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 ZSWIM3Q96MP5 696 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 GSX2Q9BZM3 304 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 SEMA4CQ9C0C4 833 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 PCDHB16Q9NRJ7 776 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 PRKAG2Q9UGJ0 569 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 CDH10Q9Y6N8 788 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 AP1M2Q9Y6Q5 423 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 A0A1B0GVI7 797 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 CDC123O75794 336 aaPredicted RBP11.65□□□□□ -0.54
UBE3B-204ENST00000449510 ACADLP28330 430 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 FAUP35544 74 aaKnown RBP11.65□□□□□ -0.54
UBE3B-204ENST00000449510 EVX1P49640 407 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 SCRN3Q0VDG4 424 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 TDGQ13569 410 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 REM2Q8IYK8 340 aaPredicted RBP11.65□□□□□ -0.54
UBE3B-204ENST00000449510 THEM6Q8WUY1 208 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 MS4A4AQ96JQ5 239 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 LMLNQ96KR4 655 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 TMEM43Q9BTV4 400 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.65□□□□□ -0.54
UBE3B-204ENST00000449510 MIXL1Q9H2W2 232 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 TRPV4Q9HBA0 871 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 C1GALT1Q9NS00 363 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 BABAM2Q9NXR7 383 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 PCDHGB7Q9Y5F8 929 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 SPACA6W5XKT8 324 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 LOXHD1Q8IVV2 1947 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 A0A1B0GV50 99 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 GOSR2O14653 212 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 PAK4O96013 591 aaPredicted RBP11.65□□□□□ -0.54
UBE3B-204ENST00000449510 SLC6A11P48066 632 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 ADAM8P78325 824 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 TAGLNQ01995 201 aaKnown RBP11.65□□□□□ -0.54
UBE3B-204ENST00000449510 TAP2Q03519 686 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 EIF2B5Q13144 721 aaKnown RBP11.65□□□□□ -0.54
UBE3B-204ENST00000449510 CRHR2Q13324 411 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 GXYLT1Q4G148 440 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 ZBTB37Q5TC79 503 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 PRAMEF17Q5VTA0 474 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 OTPQ5XKR4 325 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 PYHIN1Q6K0P9 492 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 MSANTD1Q6ZTZ1 278 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 FCRLAQ7L513 359 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 NPAS4Q8IUM7 802 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 OR4E2Q8NGC2 313 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 TMEM163Q8TC26 289 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 FOXN4Q96NZ1 517 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 LMF1Q96S06 567 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 C14orf105Q9NVL8 296 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 NDUFB11Q9NX14 153 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 B3GNT2Q9NY97 397 aa11.65□□□□□ -0.54
UBE3B-204ENST00000449510 FARS2O95363 451 aaKnown RBP11.65□□□□□ -0.55
UBE3B-204ENST00000449510 PPP1R3DO95685 299 aa11.65□□□□□ -0.55
UBE3B-204ENST00000449510 RAF1P04049 648 aa11.65□□□□□ -0.55
UBE3B-204ENST00000449510 ZNF3P17036 446 aa11.65□□□□□ -0.55
UBE3B-204ENST00000449510 CAPZA2P47755 286 aa11.65□□□□□ -0.55
UBE3B-204ENST00000449510 SP140Q13342 867 aa11.65□□□□□ -0.55
UBE3B-204ENST00000449510 PON3Q15166 354 aa11.65□□□□□ -0.55
UBE3B-204ENST00000449510 NKPD1Q17RQ9 610 aa11.65□□□□□ -0.55
UBE3B-204ENST00000449510 DEFB134Q4QY38 66 aa11.65□□□□□ -0.55
UBE3B-204ENST00000449510 NKAIN4Q8IVV8 208 aa11.65□□□□□ -0.55
UBE3B-204ENST00000449510 GHSRQ92847 366 aa11.65□□□□□ -0.55
UBE3B-204ENST00000449510 SEC22AQ96IW7 307 aa11.65□□□□□ -0.55
UBE3B-204ENST00000449510 MSLNLQ96KJ4 702 aa11.65□□□□□ -0.55
UBE3B-204ENST00000449510 NKX3-1Q99801 234 aaPredicted RBP11.65□□□□□ -0.55
UBE3B-204ENST00000449510 ELL3Q9HB65 397 aaPredicted RBP11.65□□□□□ -0.55
UBE3B-204ENST00000449510 STRCQ7RTU9 1775 aa11.65□□□□□ -0.55
UBE3B-204ENST00000449510 ANXA7P20073 488 aaKnown RBP11.64□□□□□ -0.55
UBE3B-204ENST00000449510 IL32P24001 234 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 AK4P27144 223 aaPredicted RBP11.64□□□□□ -0.55
UBE3B-204ENST00000449510 PGDP52209 483 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 FXYD6P3P58550 94 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 FAM122CQ6P4D5 195 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 TMEM88Q6PEY1 159 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 TEX261Q6UWH6 196 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 MRPL10Q7Z7H8 261 aaKnown RBP11.64□□□□□ -0.55
UBE3B-204ENST00000449510 ZNF615Q8N8J6 731 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 SDR9C7Q8NEX9 313 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 OR52E4Q8NGH9 312 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 OR9A2Q8NGT5 310 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 PDCD1LG2Q9BQ51 273 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 KXD1Q9BQD3 176 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms