RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 DPCR1Q3MIW9 517 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 SLC29A4Q7RTT9 530 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 P2RY8Q86VZ1 359 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 TDRPQ86YL5 185 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 PLCZ1Q86YW0 608 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 ANKRD53Q8N9V6 530 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 OR4M2Q8NGB6 313 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 ATG4AQ8WYN0 398 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 GFM2Q969S9 779 aaKnown RBP2.81□□□□□ -1.96
PMS1-215ENST00000447232 PHF21AQ96BD5 680 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 FBXO17Q96EF6 278 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 NODALQ96S42 347 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 VRK1Q99986 396 aaPredicted RBP2.81□□□□□ -1.96
PMS1-215ENST00000447232 TBL1YQ9BQ87 522 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 STMN4Q9H169 189 aaPredicted RBP2.81□□□□□ -1.96
PMS1-215ENST00000447232 SPNS1Q9H2V7 528 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 METTL7AQ9H8H3 244 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 TCF7L1Q9HCS4 588 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 MYNNQ9NPC7 610 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 SMYD2Q9NRG4 433 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 C1RLQ9NZP8 487 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 ZNF69Q9UC07 566 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 MCM8Q9UJA3 840 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 ANAPC7Q9UJX3 599 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 FBXO9Q9UK97 447 aaPredicted RBP2.81□□□□□ -1.96
PMS1-215ENST00000447232 DAPP1Q9UN19 280 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 AAR2Q9Y312 384 aaKnown RBP2.81□□□□□ -1.96
PMS1-215ENST00000447232 U3KQK5 164 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 TET2Q6N021 2002 aaPredicted RBP2.81□□□□□ -1.96
PMS1-215ENST00000447232 HERC1Q15751 4861 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 UQCRHLA0A096LP55 91 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 OR6C76A6NM76 312 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 ZNF814B7Z6K7 855 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 WNT9BO14905 357 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 SEC14L5O43304 696 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 CLDN9O95484 217 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 NTN1O95631 604 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 SERPIND1P05546 499 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 TUBBP07437 444 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 ENO3P13929 434 aaPredicted RBP2.81□□□□□ -1.96
PMS1-215ENST00000447232 PECAM1P16284 738 aaPredicted RBP2.81□□□□□ -1.96
PMS1-215ENST00000447232 NPPBP16860 134 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 SSR1P43307 286 aaKnown RBP2.81□□□□□ -1.96
PMS1-215ENST00000447232 ACVR1Q04771 509 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 KLF10Q13118 480 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 POU6F1Q14863 301 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 KLHL38Q2WGJ6 581 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 ACSBG2Q5FVE4 666 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 CTSL3PQ5NE16 218 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 PTRHD1Q6GMV3 140 aaKnown RBP2.81□□□□□ -1.96
PMS1-215ENST00000447232 AFTPHQ6ULP2 937 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 LCTLQ6UWM7 567 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 Q6ZSN1 163 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 USP51Q70EK9 711 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 SLC46A3Q7Z3Q1 461 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 BCL6BQ8N143 479 aaPredicted RBP2.81□□□□□ -1.96
PMS1-215ENST00000447232 TRPV3Q8NET8 790 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.81□□□□□ -1.96
PMS1-215ENST00000447232 WDR60Q8WVS4 1066 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 ADIPOR1Q96A54 375 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 MUCL1Q96DR8 90 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 ADOQ96SZ5 270 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 ISCUQ9H1K1 167 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 ZNF337Q9Y3M9 751 aa2.81□□□□□ -1.96
PMS1-215ENST00000447232 IQANK1A0A1B0GTG1 560 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 C2orf92A0A1B0GVN3 265 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 OR5H1A6NKK0 313 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 LIASO43766 372 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 AMY2AP04746 511 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 IGFBP1P08833 259 aaPredicted RBP2.8□□□□□ -1.96
PMS1-215ENST00000447232 CCDC172P0C7W6 258 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 SAGP10523 405 aaPredicted RBP2.8□□□□□ -1.96
PMS1-215ENST00000447232 COX7A2P14406 83 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 FERP16591 822 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 NAGAP17050 411 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 AMY2BP19961 511 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 COX5AP20674 150 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 COMTP21964 271 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 PSMB4P28070 264 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 ABCD3P28288 659 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 RAC3P60763 192 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 RPS3AP61247 264 aaKnown RBP2.8□□□□□ -1.96
PMS1-215ENST00000447232 HERVK_113P63132 956 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 ERVK-8P63133 956 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 HMGCS1Q01581 520 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 TNFRSF17Q02223 184 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 ID2Q02363 134 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 RASGEF1BQ0VAM2 473 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 CTBP1Q13363 440 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 FOXE3Q13461 319 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 SPARCL1Q14515 664 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 EFNB3Q15768 340 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 STK11Q15831 433 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 TOR1AIP1Q5JTV8 583 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 TCHHL1Q5QJ38 904 aaPredicted RBP2.8□□□□□ -1.96
PMS1-215ENST00000447232 FOXB2Q5VYV0 432 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 IGFL4Q6B9Z1 124 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 CASC4Q6P4E1 433 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 Q6ZT83 130 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 BZW1Q7L1Q6 419 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms