RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 RENP00797 406 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 PTNP21246 168 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 SCML1Q9UN30 329 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 KAT7O95251 611 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 KCNC3Q14003 757 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 TCEA2Q15560 299 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 ZNF322Q6U7Q0 402 aaPredicted RBP7.45□□□□□ -1.22
SMG1-202ENST00000446231 LYPD4Q6UWN0 246 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 NUDT18Q6ZVK8 323 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 TMPRSS12Q86WS5 348 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 SERPINA12Q8IW75 414 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 NANOGP1Q8N7R0 232 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 SUMF2Q8NBJ7 301 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 SNED1Q8TER0 1413 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 GAREM1Q9H706 876 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 RPH3AQ9Y2J0 694 aaPredicted RBP7.45□□□□□ -1.22
SMG1-202ENST00000446231 GLOD5A6NK44 160 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 CLDN7O95471 211 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 CBX7O95931 251 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 EVX1P49640 407 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 SMAD3P84022 425 aaKnown RBP7.45□□□□□ -1.22
SMG1-202ENST00000446231 BATFQ16520 125 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 FAHD1Q6P587 224 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 TMEM173Q86WV6 379 aaPredicted RBP7.45□□□□□ -1.22
SMG1-202ENST00000446231 TTTY10Q9BZA0 68 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 SEMA4GQ9NTN9 838 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 POMT2Q9UKY4 750 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 BET1O15155 118 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 B3GALT2O43825 422 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 RDH16O75452 317 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 IFNA2P01563 188 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 SNRPBP14678 240 aaKnown RBP7.45□□□□□ -1.22
SMG1-202ENST00000446231 TARBP2Q15633 366 aaKnown RBP7.45□□□□□ -1.22
SMG1-202ENST00000446231 Q6ZSR9 355 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 ELP5Q8TE02 316 aa7.45□□□□□ -1.22
SMG1-202ENST00000446231 HOXA2O43364 376 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 PI15O43692 258 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 RBMXP38159 391 aaKnown RBP7.44□□□□□ -1.22
SMG1-202ENST00000446231 ACTBP60709 375 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 ACTG1P63261 375 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 HERVK_113Q902F9 699 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 PITX2Q99697 317 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 PIRO00625 290 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 LDB2O43679 373 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 TDGQ13569 410 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 NKPD1Q17RQ9 610 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 RPS26P11Q5JNZ5 115 aaPredicted RBP7.44□□□□□ -1.22
SMG1-202ENST00000446231 CHST9Q7L1S5 443 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 LIX1LQ8IVB5 337 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 CDC6Q99741 560 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 MICU1Q9BPX6 476 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 HCAR1Q9BXC0 346 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 SLC6A16Q9GZN6 736 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 DUOX1Q9NRD9 1551 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 ANKRD26Q9UPS8 1709 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 ASGR1P07306 291 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 PRKAR1BP31321 381 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.44□□□□□ -1.22
SMG1-202ENST00000446231 PIANPQ8IYJ0 282 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 SMIM35A0A1B0GVV1 85 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 LSSP48449 732 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 CHRFAM7AQ494W8 412 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 SLC7A13Q8TCU3 470 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 SCGB1D1O95968 90 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 ADRB3P13945 408 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 CPEP16870 476 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 GIMAP1Q8WWP7 306 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 SMPDL3AQ92484 453 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 ZNF223Q9UK11 482 aaPredicted RBP7.44□□□□□ -1.22
SMG1-202ENST00000446231 PEX10O60683 326 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 MAGEB1P43366 347 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 THAP4Q8WY91 577 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 GFRA2O00451 464 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 GABRPO00591 440 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 GRK6P43250 576 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 PIN1Q13526 163 aaPredicted RBP7.44□□□□□ -1.22
SMG1-202ENST00000446231 RD3Q7Z3Z2 195 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 SKA3Q8IX90 412 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 OR2A12Q8NGT7 310 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 LGALS14Q8TCE9 139 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 ECHDC3Q96DC8 303 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 KCNK12Q9HB15 430 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 KHNYNO15037 678 aaKnown RBP7.44□□□□□ -1.22
SMG1-202ENST00000446231 NPC1O15118 1278 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 CSO75390 466 aaKnown RBP7.44□□□□□ -1.22
SMG1-202ENST00000446231 SBK3P0C264 359 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 PIPP12273 146 aaPredicted RBP7.44□□□□□ -1.22
SMG1-202ENST00000446231 AMY2BP19961 511 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 ITGB7P26010 798 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 CDKN1CP49918 316 aaPredicted RBP7.44□□□□□ -1.22
SMG1-202ENST00000446231 ZNF616Q08AN1 781 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 RSPH9Q9H1X1 276 aaPredicted RBP7.44□□□□□ -1.22
SMG1-202ENST00000446231 FBXL21Q9UKT6 434 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 SMCHD1A6NHR9 2005 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 ANHXE9PGG2 379 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 ELK1P19419 428 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 ETV5P41161 510 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 EXOSC2Q13868 293 aaKnown RBP7.44□□□□□ -1.22
SMG1-202ENST00000446231 GBX1Q14549 363 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 TRIM46Q7Z4K8 759 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms