RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 OR4F15Q8NGB8 312 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 HAVCR1Q96D42 359 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 TMEM121BQ9BXQ6 578 aaPredicted RBP15.64■□□□□ 0.09
TCOF1-206ENST00000445265 TLX3O43711 291 aaPredicted RBP15.64■□□□□ 0.09
TCOF1-206ENST00000445265 PRSS23O95084 383 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 PPP1R3DO95685 299 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 SLC1A3P43003 542 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 CHRNEQ04844 493 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 KIR2DS3Q14952 304 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 TATDN3Q17R31 274 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 PGBD2Q6P3X8 592 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 LRRC28Q86X40 367 aaPredicted RBP15.64■□□□□ 0.09
TCOF1-206ENST00000445265 CYB561A3Q8NBI2 242 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 DNAJA4Q8WW22 397 aaPredicted RBP15.64■□□□□ 0.09
TCOF1-206ENST00000445265 CDS1Q92903 461 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 PMEPA1Q969W9 287 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 THAP7Q9BT49 309 aaPredicted RBP15.64■□□□□ 0.09
TCOF1-206ENST00000445265 CENPMQ9NSP4 180 aa15.64■□□□□ 0.09
TCOF1-206ENST00000445265 TSPAN4O14817 238 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 COL11A1P12107 1806 aaPredicted RBP15.63■□□□□ 0.09
TCOF1-206ENST00000445265 HYAL2Q12891 473 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 PUS10Q3MIT2 529 aaKnown RBP15.63■□□□□ 0.09
TCOF1-206ENST00000445265 PYCR3Q53H96 274 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 ATAD3CQ5T2N8 411 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 SPATC1Q76KD6 591 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 OR2L8Q8NGY9 312 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 DPYSL5Q9BPU6 564 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 APOOQ9BUR5 198 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 PIGUQ9H490 435 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 ZNF432O94892 652 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 AIFM1O95831 613 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 CCKBRP32239 447 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 OSGIN1Q9UJX0 560 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 TTC3P53804 2025 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 MICAL3Q7RTP6 2002 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 KANTRA0A1W2PQU2 76 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 GABRPO00591 440 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 PLPP1O14494 284 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 PRAMEF17Q5VTA0 474 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 KIAA1211LQ6NV74 962 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 KCTD18Q6PI47 426 aaPredicted RBP15.63■□□□□ 0.09
TCOF1-206ENST00000445265 MEPCEQ7L2J0 689 aaKnown RBP15.63■□□□□ 0.09
TCOF1-206ENST00000445265 PPP1R14AQ96A00 147 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 BPIFA2Q96DR5 249 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 OR8D2Q9GZM6 311 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 GLIPR2Q9H4G4 154 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 TRPV4Q9HBA0 871 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 CD93Q9NPY3 652 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 POU2F3Q9UKI9 436 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 MAN2A2P49641 1150 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 AP2S1P53680 142 aaPredicted RBP15.63■□□□□ 0.09
TCOF1-206ENST00000445265 KIAA0040Q15053 153 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 ODF4Q2M2E3 257 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 TMPRSS12Q86WS5 348 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 ELMOD2Q8IZ81 293 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 CELF2-AS1Q8N7Q2 184 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 RIT1Q92963 219 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 KIAA1143Q96AT1 154 aaPredicted RBP15.63■□□□□ 0.09
TCOF1-206ENST00000445265 MMABQ96EY8 250 aaPredicted RBP15.63■□□□□ 0.09
TCOF1-206ENST00000445265 AMDHD1Q96NU7 426 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 INSM2Q96T92 566 aaPredicted RBP15.63■□□□□ 0.09
TCOF1-206ENST00000445265 GON7Q9BXV9 100 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 NANSQ9NR45 359 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 SLC6A13Q9NSD5 602 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 TAAR2Q9P1P5 351 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 SCP2D1Q9UJQ7 156 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 ZNF443Q9Y2A4 671 aaPredicted RBP15.63■□□□□ 0.09
TCOF1-206ENST00000445265 CACNG2Q9Y698 323 aa15.63■□□□□ 0.09
TCOF1-206ENST00000445265 ZAR1LA6NP61 321 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 EPHA2P29317 976 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 MASP1P48740 699 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 SNRPD2P62316 118 aaKnown RBP15.62■□□□□ 0.09
TCOF1-206ENST00000445265 PDE7AQ13946 482 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 ZNF385BQ569K4 471 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 HACD4Q5VWC8 232 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 ADAMTSL4Q6UY14 1074 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 OR2AJ1Q8NGZ0 328 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 KCTD12Q96CX2 325 aaKnown RBP15.62■□□□□ 0.09
TCOF1-206ENST00000445265 C1GALT1Q9NS00 363 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 NUDT15Q9NV35 164 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 ENTPD2Q9Y5L3 495 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 NUBP2Q9Y5Y2 271 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 CBLP22681 906 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 IRF4Q15306 451 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 GLT8D1Q68CQ7 371 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 PPIL3Q9H2H8 161 aaKnown RBP15.62■□□□□ 0.09
TCOF1-206ENST00000445265 EVA1AQ9H8M9 152 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 CXorf51AA0A1B0GTR3 108 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 A8MU76 341 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 SLC19A1P41440 591 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 SLC6A11P48066 632 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 RPS25P62851 125 aaKnown RBP15.62■□□□□ 0.09
TCOF1-206ENST00000445265 TIAL1Q01085 375 aaKnown RBP eCLIP15.62■□□□□ 0.09
TCOF1-206ENST00000445265 TPRA1Q86W33 373 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 OR52I1Q8NGK6 324 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 SMPDL3BQ92485 455 aa15.62■□□□□ 0.09
TCOF1-206ENST00000445265 TSACCQ96A04 125 aaPredicted RBP15.62■□□□□ 0.09
TCOF1-206ENST00000445265 RBBP6Q7Z6E9 1792 aaKnown RBP15.62■□□□□ 0.09
TCOF1-206ENST00000445265 A0A1B0GVI7 797 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 FAM183AA6NL82 134 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms