RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 A4GALTQ9NPC4 353 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 THUMPD1Q9NXG2 353 aaKnown RBP15.81■□□□□ 0.12
LIME1-202ENST00000444951 FLRT3Q9NZU0 649 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 LRFN1Q9P244 771 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 TMEM181Q9P2C4 612 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 PLEKHB1Q9UF11 243 aaPredicted RBP15.81■□□□□ 0.12
LIME1-202ENST00000444951 LIPT1Q9Y234 373 aa15.81■□□□□ 0.12
LIME1-202ENST00000444951 GSTA4O15217 222 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 HS6ST1O60243 411 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 TSPAN2O60636 221 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 HNRNPCL1O60812 293 aaKnown RBP15.8■□□□□ 0.12
LIME1-202ENST00000444951 STX11O75558 287 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 PDE5AO76074 875 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 UTS2O95399 124 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 AK1P00568 194 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 ARAFP10398 606 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 BMP2P12643 396 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 MSX2P35548 267 aaPredicted RBP15.8■□□□□ 0.12
LIME1-202ENST00000444951 GZMMP51124 257 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 EEFSECP57772 596 aaKnown RBP15.8■□□□□ 0.12
LIME1-202ENST00000444951 CHRNEQ04844 493 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 OR1C1Q15619 314 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 ZNF791Q3KP31 576 aaPredicted RBP15.8■□□□□ 0.12
LIME1-202ENST00000444951 FLYWCH1Q4VC44 716 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 SPINK14Q6IE38 97 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 SERPINA11Q86U17 422 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 CALHM3Q86XJ0 350 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 ZNF614Q8N883 585 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 C11orf65Q8NCR3 313 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 CATSPER1Q8NEC5 780 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 FAM110BQ8TC76 370 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 CLPTM1LQ96KA5 538 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 SIGLEC12Q96PQ1 595 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 TRNT1Q96Q11 434 aaKnown RBP15.8■□□□□ 0.12
LIME1-202ENST00000444951 THTPAQ9BU02 230 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 ALG2Q9H553 416 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 RUBCNLQ9H714 662 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 ABCD2Q9UBJ2 740 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 AP3M1Q9Y2T2 418 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 WDR45Q9Y484 360 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 CPAMD8Q8IZJ3 1885 aa15.8■□□□□ 0.12
LIME1-202ENST00000444951 OR5H15A6NDH6 313 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 OR6C70A6NIJ9 312 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 FAM220BPB1ANY3 271 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 G3V3Y1 287 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 TP53I11O14683 189 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 ICOSLGO75144 302 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 NAGAP17050 411 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 RASSF2P50749 326 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 CRISP3P54108 245 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 PNLIPRP2P54317 469 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 NCALDP61601 193 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 PSPHP78330 225 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 EFR3AQ14156 821 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 GNA13Q14344 377 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 MAPK11Q15759 364 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 NTRK2Q16620 822 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 ZNF630Q2M218 657 aaPredicted RBP15.79■□□□□ 0.12
LIME1-202ENST00000444951 VMACQ2NL98 169 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 GRAMD1BQ3KR37 738 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 DNAL1Q4LDG9 190 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 C4orf17Q53FE4 359 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 SAMD4BQ5PRF9 694 aaKnown RBP15.79■□□□□ 0.12
LIME1-202ENST00000444951 PRAMEF20Q5VT98 475 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 RTL4Q6ZR62 310 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 NUP54Q7Z3B4 507 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 MDGA2Q7Z553 956 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 NET1Q7Z628 596 aaPredicted RBP15.79■□□□□ 0.12
LIME1-202ENST00000444951 MICU2Q8IYU8 434 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 HGDQ93099 445 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 REXO5Q96IC2 774 aaKnown RBP15.79■□□□□ 0.12
LIME1-202ENST00000444951 NODALQ96S42 347 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 QRSL1Q9H0R6 528 aaKnown RBP15.79■□□□□ 0.12
LIME1-202ENST00000444951 C1orf21Q9H246 121 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 TMEM38AQ9H6F2 299 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 KLHL1Q9NR64 748 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 ANGPT4Q9Y264 503 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 CSAG2Q9Y5P2 127 aa15.79■□□□□ 0.12
LIME1-202ENST00000444951 DOPEY1Q5JWR5 2465 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 ELOVL7A1L3X0 281 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 A1L4Q6 167 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 PRORSD1PA6NEY8 169 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 ERICH4A6NGS2 130 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 ABCB7O75027 752 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 CCL3P10147 92 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 HPGDP15428 266 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 CEACAM7Q14002 265 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 ZSCAN26Q16670 478 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.78■□□□□ 0.12
LIME1-202ENST00000444951 BICRALQ6AI39 1079 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 TYW3Q6IPR3 259 aaKnown RBP15.78■□□□□ 0.12
LIME1-202ENST00000444951 REEP3Q6NUK4 255 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 FRRS1Q6ZNA5 592 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 LRRC74BQ6ZQY2 392 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 LURAP1LQ8IV03 231 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 ZADH2Q8N4Q0 377 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 OR4C3Q8NH37 302 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 SSC4DQ8WTU2 575 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 TM9SF4Q92544 642 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 TMCO6Q96DC7 493 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms