RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 WWTR1Q9GZV5 400 aa8.79□□□□□ -1
SMPD4P1-203ENST00000443839 NXF5Q9H1B4 397 aaKnown RBP8.79□□□□□ -1
SMPD4P1-203ENST00000443839 Q9H521 79 aa8.79□□□□□ -1
SMPD4P1-203ENST00000443839 ARMC7Q9H6L4 198 aa8.79□□□□□ -1
SMPD4P1-203ENST00000443839 PAPOLBQ9NRJ5 636 aaKnown RBP8.79□□□□□ -1
SMPD4P1-203ENST00000443839 RHCGQ9UBD6 479 aa8.79□□□□□ -1
SMPD4P1-203ENST00000443839 PCDHGA3Q9Y5H0 932 aa8.79□□□□□ -1
SMPD4P1-203ENST00000443839 C7orf72A4D263 438 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 FRG2CA6NGY1 282 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 CLDN24A6NM45 220 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 C9orf172C9J069 976 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 FRS3O43559 492 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 UGT2B17O75795 530 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 GADD45GO95257 159 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 EPPINO95925 133 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 IGKV1D-16P01601 117 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 ALPLP05186 524 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 NID1P14543 1247 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 DRD5P21918 477 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 RPS4Y1P22090 263 aaKnown RBP8.78□□□□□ -1
SMPD4P1-203ENST00000443839 PRKACGP22612 351 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 FOLR3P41439 243 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 RNF144AP50876 292 aaPredicted RBP8.78□□□□□ -1
SMPD4P1-203ENST00000443839 RGS8P57771 180 aaPredicted RBP8.78□□□□□ -1
SMPD4P1-203ENST00000443839 DCAF7P61962 342 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 MAPK14Q16539 360 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 C6orf52Q5T4I8 152 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 TCTN3Q6NUS6 607 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 TMEM205Q6UW68 189 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 HSDL2Q6YN16 418 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 ZNF836Q6ZNA1 936 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 TAGAPQ8N103 731 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 CLIP4Q8N3C7 705 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 GALNT15Q8N3T1 639 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 OR2Y1Q8NGV0 311 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 EFHD2Q96C19 240 aaPredicted RBP8.78□□□□□ -1
SMPD4P1-203ENST00000443839 NRBF2Q96F24 287 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 LMF1Q96S06 567 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 OSBPL11Q9BXB4 747 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 NRSN2Q9GZP1 204 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 SMURF2Q9HAU4 748 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 SMPD3Q9NY59 655 aaPredicted RBP8.78□□□□□ -1
SMPD4P1-203ENST00000443839 PDP1Q9P0J1 537 aaPredicted RBP8.78□□□□□ -1
SMPD4P1-203ENST00000443839 KIF17Q9P2E2 1029 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 MRTO4Q9UKD2 239 aaKnown RBP8.78□□□□□ -1
SMPD4P1-203ENST00000443839 RAB26Q9ULW5 256 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 LYVE1Q9Y5Y7 322 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 AP4B1Q9Y6B7 739 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 CDC14CA4D256 554 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 HS6ST1O60243 411 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 KLF7O75840 302 aaPredicted RBP8.78□□□□□ -1
SMPD4P1-203ENST00000443839 TNFSF15O95150 251 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 DLGAP3O95886 979 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 HPRP00739 348 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 GUSBP08236 651 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 CD63P08962 238 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 NR0B1P51843 470 aaKnown RBP8.78□□□□□ -1
SMPD4P1-203ENST00000443839 LIMK1P53667 647 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 PSMD4P55036 377 aaKnown RBP8.78□□□□□ -1
SMPD4P1-203ENST00000443839 EEF1A1P68104 462 aaKnown RBP8.78□□□□□ -1
SMPD4P1-203ENST00000443839 PPP2R2BQ00005 443 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 TARDBPQ13148 414 aaKnown RBP eCLIP8.78□□□□□ -14e-6■■■□□ 17.5
SMPD4P1-203ENST00000443839 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.78□□□□□ -1
SMPD4P1-203ENST00000443839 FGD3Q5JSP0 725 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 COLEC12Q5KU26 742 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 PDZK1Q5T2W1 519 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 MRPL2Q5T653 305 aaKnown RBP8.78□□□□□ -1
SMPD4P1-203ENST00000443839 APCDD1LQ8NCL9 501 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 ZFAND2BQ8WV99 257 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 ADIPOR1Q96A54 375 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 VMP1Q96GC9 406 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 BARD1Q99728 777 aaKnown RBP8.78□□□□□ -1
SMPD4P1-203ENST00000443839 ARHGDIGQ99819 225 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 OSBPL10Q9BXB5 764 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 NMNAT1Q9HAN9 279 aaPredicted RBP8.78□□□□□ -1
SMPD4P1-203ENST00000443839 FOXJ2Q9P0K8 574 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 KCNE5Q9UJ90 142 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 CHST2Q9Y4C5 530 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 ORC6Q9Y5N6 252 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 SDK2Q58EX2 2172 aa8.78□□□□□ -1
SMPD4P1-203ENST00000443839 TRBV11-1A0A0K0K1C0 115 aa8.77□□□□□ -1.01
SMPD4P1-203ENST00000443839 CDHR4A6H8M9 788 aa8.77□□□□□ -1.01
SMPD4P1-203ENST00000443839 PROB1E7EW31 1015 aa8.77□□□□□ -1.01
SMPD4P1-203ENST00000443839 AP3D1O14617 1153 aa8.77□□□□□ -1.01
SMPD4P1-203ENST00000443839 FFAR1O14842 300 aa8.77□□□□□ -1.01
SMPD4P1-203ENST00000443839 SEMA7AO75326 666 aa8.77□□□□□ -1.01
SMPD4P1-203ENST00000443839 DKK1O94907 266 aa8.77□□□□□ -1.01
SMPD4P1-203ENST00000443839 H1F0P07305 194 aaKnown RBP8.77□□□□□ -1.01
SMPD4P1-203ENST00000443839 UMODP07911 640 aa8.77□□□□□ -1.01
SMPD4P1-203ENST00000443839 HPGDP15428 266 aa8.77□□□□□ -1.01
SMPD4P1-203ENST00000443839 TCN2P20062 427 aa8.77□□□□□ -1.01
SMPD4P1-203ENST00000443839 IL12BP29460 328 aa8.77□□□□□ -1.01
SMPD4P1-203ENST00000443839 KRT20P35900 424 aa8.77□□□□□ -1.01
SMPD4P1-203ENST00000443839 GPR143P51810 404 aa8.77□□□□□ -1.01
SMPD4P1-203ENST00000443839 TAS2R41P59536 307 aa8.77□□□□□ -1.01
SMPD4P1-203ENST00000443839 RNF4P78317 190 aa8.77□□□□□ -1.01
SMPD4P1-203ENST00000443839 ROR2Q01974 943 aaKnown RBP8.77□□□□□ -1.01
SMPD4P1-203ENST00000443839 PIN1Q13526 163 aaPredicted RBP8.77□□□□□ -1.01
SMPD4P1-203ENST00000443839 EXOC3L2Q2M3D2 409 aa8.77□□□□□ -1.01
SMPD4P1-203ENST00000443839 TIPARPQ7Z3E1 657 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms