RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 CLDN15P56746 228 aa17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 C21orf58P58505 322 aa17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 ABCE1P61221 599 aaKnown RBP17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 FOXF2Q12947 444 aa17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 STX5Q13190 355 aa17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 SNTB1Q13884 538 aaKnown RBP17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 CHI3L2Q15782 390 aa17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 CEP85LQ5SZL2 805 aa17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 ZAR1Q86SH2 424 aa17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 ZNF781Q8N8C0 355 aa17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 FBXO30Q8TB52 745 aa17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 SLC9A6Q92581 669 aa17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 WNT2BQ93097 391 aa17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 TUBGCP3Q96CW5 907 aa17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 C1GALT1C1Q96EU7 318 aa17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 ZFP3Q96NJ6 502 aa17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 SORT1Q99523 831 aa17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 FBXO34Q9NWN3 711 aa17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 ASIC5Q9NY37 505 aa17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 ACTL7BQ9Y614 415 aa17.11■□□□□ 0.33
HMGB3P22-201ENST00000442010 F8P00451 2351 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 A0A1W2PRB8 838 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 ALG1L2C9J202 215 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 HSPA4LO95757 839 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 ANGPTL1O95841 491 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 TMIGD3P0DMS9 266 aaPredicted RBP17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 HK1P19367 917 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 OPRM1P35372 400 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 CLK3P49761 638 aaKnown RBP17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 AGFG1P52594 562 aaKnown RBP17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 EMX2Q04743 252 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 C17orf67Q0P5P2 114 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 TMEM44Q2T9K0 475 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 SMU1Q2TAY7 513 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 CPTPQ5TA50 214 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 GALNT10Q86SR1 603 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 NATD1Q8N6N6 113 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 OR4C3Q8NH37 302 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 OR5P2Q8WZ92 322 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 PGM2Q96G03 612 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 TM9SF2Q99805 663 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 PTGES2Q9H7Z7 377 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 GIN1Q9NXP7 522 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 HAO1Q9UJM8 370 aa17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 FOXD3Q9UJU5 478 aaPredicted RBP17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.1■□□□□ 0.33
HMGB3P22-201ENST00000442010 FAM221AA4D161 298 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 OXSR1O95747 527 aaPredicted RBP17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 HMGN2P05204 90 aaKnown RBP17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 TUBBP07437 444 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 ALOX5P09917 674 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 G6PDP11413 515 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 PEPDP12955 493 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 PRPS1L1P21108 318 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 TBXA2RP21731 343 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 UQCRC1P31930 480 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 PEX19P40855 299 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 PRIM2P49643 509 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 MYBPHQ13203 477 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 GLYR1Q49A26 553 aaPredicted RBP17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 FIGNL1Q6PIW4 674 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 SZRD1Q7Z422 152 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 CAMKMTQ7Z624 323 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 PPP1R14CQ8TAE6 165 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 OTUB1Q96FW1 271 aaPredicted RBP17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 STACQ99469 402 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 YIPF4Q9BSR8 244 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 TBL1XR1Q9BZK7 514 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 BHLHE41Q9C0J9 482 aaPredicted RBP17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 CXorf36Q9H7Y0 433 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 DUSP22Q9NRW4 184 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 ZCCHC3Q9NUD5 404 aaKnown RBP17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 GPATCH2Q9NW75 528 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 RAP2CQ9Y3L5 183 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 ZNF337Q9Y3M9 751 aa17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 TEP1Q99973 2627 aaKnown RBP17.09■□□□□ 0.33
HMGB3P22-201ENST00000442010 OR2M5A3KFT3 312 aa17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 LINC01387J3KSC0 135 aa17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 ZWINTO95229 277 aa17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 C6orf47O95873 294 aa17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 TGM6O95932 706 aa17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 LCN1P31025 176 aa17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 DGKQP52824 942 aa17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 SUCLG1P53597 346 aaKnown RBP17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 CLDN8P56748 225 aa17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 MAD2L1Q13257 205 aaPredicted RBP17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 LASP1Q14847 261 aaKnown RBP17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 PDCD2Q16342 344 aaPredicted RBP17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 RAET1LQ5VY80 246 aa17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 OR5M1Q8NGP8 315 aa17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 GOT1L1Q8NHS2 421 aaPredicted RBP17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 ZBTB9Q96C00 473 aa17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 SFXN3Q9BWM7 321 aa17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 BTBD2Q9BX70 525 aa17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 PIGUQ9H490 435 aa17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 AKTIPQ9H8T0 292 aa17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 ATAD3AQ9NVI7 634 aa17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 CRIM1Q9NZV1 1036 aa17.08■□□□□ 0.32
HMGB3P22-201ENST00000442010 EIF3LQ9Y262 564 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms