RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 NTNG2Q96CW9 530 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 RCN3Q96D15 328 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 MBD6Q96DN6 1003 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 FBXL20Q96IG2 436 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 FAM173AQ9BQD7 235 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 MESP1Q9BRJ9 268 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 PCDHAC1Q9H158 963 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 RAD21L1Q9H4I0 556 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 IL1RL2Q9HB29 575 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 ENPP5Q9UJA9 477 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 RAP2CQ9Y3L5 183 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 SVILO95425 2214 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 DYRK3O43781 588 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 LCMT2O60294 686 aaKnown RBP5.56□□□□□ -1.52
PTPRR-204ENST00000440835 CLEC3AO75596 197 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 TOXO94900 526 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 GLSO94925 669 aaPredicted RBP5.56□□□□□ -1.52
PTPRR-204ENST00000440835 BMP4P12644 408 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 HPGDP15428 266 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 ZNF37AP17032 561 aaPredicted RBP5.56□□□□□ -1.52
PTPRR-204ENST00000440835 PIK3R1P27986 724 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 YBX1P67809 324 aaKnown RBP5.56□□□□□ -1.52
PTPRR-204ENST00000440835 SQLEQ14534 574 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 RIPPLY2Q5TAB7 128 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 GTF2IRD2BQ6EKJ0 949 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 OPN5Q6U736 354 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 NXPE4Q6UWF7 544 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 C16orf89Q6UX73 402 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 ZBTB49Q6ZSB9 765 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 GTF2IRD2Q86UP8 949 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 CD163Q86VB7 1156 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 ZNF227Q86WZ6 799 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 SULF2Q8IWU5 870 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 OFCC1Q8IZS5 231 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 CENPLQ8N0S6 344 aaPredicted RBP5.56□□□□□ -1.52
PTPRR-204ENST00000440835 KRT78Q8N1N4 520 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 PLD6Q8N2A8 252 aaKnown RBP5.56□□□□□ -1.52
PTPRR-204ENST00000440835 PARP8Q8N3A8 854 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 NAXEQ8NCW5 288 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 ZCCHC10Q8TBK6 192 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 SARAFQ96BY9 339 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 UBXN10Q96LJ8 280 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 OR52B2Q96RD2 323 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 SLC30A3Q99726 388 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 CRLF2Q9HC73 371 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 LYRM4Q9HD34 91 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 HMG20AQ9NP66 347 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 ARL15Q9NXU5 204 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 ADGRE2Q9UHX3 823 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 RNF112Q9ULX5 631 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 CENPEQ02224 2701 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 IGHV3-20A0A0C4DH32 117 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 TRPC5OSA6NMA1 111 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 SUPT3HB4E1H0 165 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 H3BUI4 141 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 TRIM77I1YAP6 450 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 C19orf84I3L1E1 186 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 SNPHO15079 494 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 NOL3O60936 208 aaKnown RBP5.56□□□□□ -1.52
PTPRR-204ENST00000440835 KERAO60938 352 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 TSPAN9O75954 239 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 SEC14L2O76054 403 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 CD1DP15813 335 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 CNR1P21554 472 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 ARHGDIBP52566 201 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 CDKN2DP55273 166 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 EEF1A1P68104 462 aaKnown RBP5.56□□□□□ -1.52
PTPRR-204ENST00000440835 EEF1A1P5Q5VTE0 462 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 PRSS41Q7RTY9 318 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 FGD2Q7Z6J4 655 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 ADAMTSL2Q86TH1 951 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 ARMC8Q8IUR7 673 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 EPHX4Q8IUS5 362 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 CA13Q8N1Q1 262 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 FAM109AQ8N4B1 249 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 CCNYL1Q8N7R7 359 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 APCDD1LQ8NCL9 501 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 EEF1AKMT1Q8WVE0 214 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 LINGO1Q96FE5 620 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 HS6ST2Q96MM7 605 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 PELOQ9BRX2 385 aaKnown RBP5.56□□□□□ -1.52
PTPRR-204ENST00000440835 TMUB1Q9BVT8 246 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 OR2B2Q9GZK3 357 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 WDR12Q9GZL7 423 aaKnown RBP5.56□□□□□ -1.52
PTPRR-204ENST00000440835 WDR41Q9HAD4 459 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 C8orf4Q9NR00 106 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 FARSBQ9NSD9 589 aaKnown RBP5.56□□□□□ -1.52
PTPRR-204ENST00000440835 ADPRHL2Q9NX46 363 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 NUDT4Q9NZJ9 180 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 ZNF229Q9UJW7 825 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 RNF6Q9Y252 685 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 TESMINQ9Y4I5 508 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 SPACA6W5XKT8 324 aa5.56□□□□□ -1.52
PTPRR-204ENST00000440835 PRRC2CQ9Y520 2896 aaKnown RBP5.55□□□□□ -1.52
PTPRR-204ENST00000440835 SPENQ96T58 3664 aaKnown RBP5.55□□□□□ -1.52
PTPRR-204ENST00000440835 A0A0G2JMP0 313 aa5.55□□□□□ -1.52
PTPRR-204ENST00000440835 A0A0X1KG70 313 aa5.55□□□□□ -1.52
PTPRR-204ENST00000440835 SAC3D1A6NKF1 404 aa5.55□□□□□ -1.52
PTPRR-204ENST00000440835 HSPB2A8KAH6 182 aa5.55□□□□□ -1.52
PTPRR-204ENST00000440835 ALG1L2C9J202 215 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms