RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 CLCF1Q9UBD9 225 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 ABCG2Q9UNQ0 655 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 SNX8Q9Y5X2 465 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 FREM1Q5H8C1 2179 aa12.52□□□□□ -0.4
PRAME-209ENST00000439106 NPIPA5A0A0B4J1W7 369 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 A0A1W2PRB8 838 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 EEF1E1-BLOC1S5C9J1V9 151 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 NPIPA7E9PJI5 369 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 H3BML4 177 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 SEC14L5O43304 696 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 EEF1E1O43324 174 aaKnown RBP12.52□□□□□ -0.41
PRAME-209ENST00000439106 KCNK2O95069 426 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 SERPINE1P05121 402 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 IFI6P09912 130 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 DHRS4L1P0CG22 281 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 NPIPA8P0DM63 369 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 TMIGD3P0DMS9 266 aaPredicted RBP12.52□□□□□ -0.41
PRAME-209ENST00000439106 CPN1P15169 458 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 ASCL1P50553 236 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 PSMD4P55036 377 aaKnown RBP12.52□□□□□ -0.41
PRAME-209ENST00000439106 TP53BP2Q13625 1128 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 LASP1Q14847 261 aaKnown RBP12.52□□□□□ -0.41
PRAME-209ENST00000439106 TNFAIP8L3Q5GJ75 292 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 AAGABQ6PD74 315 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 ARSKQ6UWY0 536 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 LRIG3Q6UXM1 1119 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 ADGRE4PQ86SQ3 457 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 ANKRD42Q8N9B4 389 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 CDRT4Q8N9R6 151 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 OR4C3Q8NH37 302 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 OR5AK3PQ8NH89 298 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 CEP70Q8NHQ1 597 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 SMPDL3BQ92485 455 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 CDS1Q92903 461 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 SORT1Q99523 831 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 NPAS1Q99742 590 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 TBL1XR1Q9BZK7 514 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 CXorf36Q9H7Y0 433 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 C3orf14Q9HBI5 128 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 MRTO4Q9UKD2 239 aaKnown RBP12.52□□□□□ -0.41
PRAME-209ENST00000439106 VDAC3Q9Y277 283 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 PRR14LQ5THK1 2151 aa12.52□□□□□ -0.41
PRAME-209ENST00000439106 OXSR1O95747 527 aaPredicted RBP12.51□□□□□ -0.41
PRAME-209ENST00000439106 TGM6O95932 706 aa12.51□□□□□ -0.41
PRAME-209ENST00000439106 HMGN2P05204 90 aaKnown RBP12.51□□□□□ -0.41
PRAME-209ENST00000439106 ALOX5P09917 674 aa12.51□□□□□ -0.41
PRAME-209ENST00000439106 POU3F2P20265 443 aaPredicted RBP12.51□□□□□ -0.41
PRAME-209ENST00000439106 CTSSP25774 331 aa12.51□□□□□ -0.41
PRAME-209ENST00000439106 SLC1A6P48664 564 aa12.51□□□□□ -0.41
PRAME-209ENST00000439106 SUCLG1P53597 346 aaKnown RBP12.51□□□□□ -0.41
PRAME-209ENST00000439106 DIO3P55073 304 aa12.51□□□□□ -0.41
PRAME-209ENST00000439106 SF3B4Q15427 424 aaKnown RBP eCLIP12.51□□□□□ -0.412e-46■□□□□ 9
PRAME-209ENST00000439106 VPS26BQ4G0F5 336 aa12.51□□□□□ -0.41
PRAME-209ENST00000439106 CPTPQ5TA50 214 aa12.51□□□□□ -0.41
PRAME-209ENST00000439106 RIMKLAQ8IXN7 391 aa12.51□□□□□ -0.41
PRAME-209ENST00000439106 CLEC4FQ8N1N0 589 aa12.51□□□□□ -0.41
PRAME-209ENST00000439106 COX18Q8N8Q8 333 aa12.51□□□□□ -0.41
PRAME-209ENST00000439106 INTS12Q96CB8 462 aaKnown RBP12.51□□□□□ -0.41
PRAME-209ENST00000439106 C1GALT1C1Q96EU7 318 aa12.51□□□□□ -0.41
PRAME-209ENST00000439106 PAIP2Q9BPZ3 127 aaKnown RBP12.51□□□□□ -0.41
PRAME-209ENST00000439106 CALHM2Q9HA72 323 aa12.51□□□□□ -0.41
PRAME-209ENST00000439106 SSU72Q9NP77 194 aaKnown RBP12.51□□□□□ -0.41
PRAME-209ENST00000439106 GIN1Q9NXP7 522 aa12.51□□□□□ -0.41
PRAME-209ENST00000439106 CRIM1Q9NZV1 1036 aa12.51□□□□□ -0.41
PRAME-209ENST00000439106 NTMQ9P121 344 aa12.51□□□□□ -0.41
PRAME-209ENST00000439106 KCNN3Q9UGI6 736 aa12.51□□□□□ -0.41
PRAME-209ENST00000439106 ZNF337Q9Y3M9 751 aa12.51□□□□□ -0.41
PRAME-209ENST00000439106 KCNE3Q9Y6H6 103 aa12.51□□□□□ -0.41
PRAME-209ENST00000439106 OR2M5A3KFT3 312 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 TM9SF1O15321 606 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 BIRC5O15392 142 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 CHMP24386 653 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 SOAT1P35610 550 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 CLK3P49761 638 aaKnown RBP12.5□□□□□ -0.41
PRAME-209ENST00000439106 CLDN15P56746 228 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 CLDN20P56880 219 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 RPS26P62854 115 aaKnown RBP12.5□□□□□ -0.41
PRAME-209ENST00000439106 POU6F2P78424 691 aaPredicted RBP12.5□□□□□ -0.41
PRAME-209ENST00000439106 PRR5P85299 388 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 MLC1Q15049 377 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 PGS1Q32NB8 556 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 EXOSC6Q5RKV6 272 aaKnown RBP12.5□□□□□ -0.41
PRAME-209ENST00000439106 OR4F3Q6IEY1 312 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 LUZP2Q86TE4 346 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 CDH24Q86UP0 819 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 GRAMD2AQ8IUY3 354 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 CLECL1Q8IZS7 167 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 FAM110BQ8TC76 370 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 MGARPQ8TDB4 240 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 FIG4Q92562 907 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 RNASE6Q93091 150 aaKnown RBP12.5□□□□□ -0.41
PRAME-209ENST00000439106 SH3YL1Q96HL8 342 aaPredicted RBP12.5□□□□□ -0.41
PRAME-209ENST00000439106 ZNF845Q96IR2 970 aaPredicted RBP12.5□□□□□ -0.41
PRAME-209ENST00000439106 DUSP26Q9BV47 211 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 NUF2Q9BZD4 464 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 PTGES2Q9H7Z7 377 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 AKTIPQ9H8T0 292 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 SDHAF3Q9NRP4 125 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 PNPOQ9NVS9 261 aa12.5□□□□□ -0.41
PRAME-209ENST00000439106 ZNF629Q9UEG4 869 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms