RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 RWDD2BP57060 319 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 PPIAP62937 165 aaKnown RBP2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 IL9RQ01113 521 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 NAAAQ02083 359 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 IL24Q13007 206 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 DDX39BQ13838 428 aaKnown RBP2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 IDI1Q13907 227 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 WDR43Q15061 677 aaKnown RBP eCLIP2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 ZNF239Q16600 458 aaKnown RBP2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 C17orf58Q2M2W7 97 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 SLC36A3Q495N2 470 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 CFAP221Q4G0U5 840 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 KCTD21Q4G0X4 260 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 C14orf28Q4W4Y0 310 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 TCHHL1Q5QJ38 904 aaPredicted RBP2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 ZYG11AQ6WRX3 759 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 DPY19L2P2Q6ZN68 376 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 Q6ZR54 194 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 MISPQ8IVT2 679 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 CDH26Q8IXH8 852 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 CENPLQ8N0S6 344 aaPredicted RBP2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 GPD1LQ8N335 351 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 BBS5Q8N3I7 341 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 LRRC17Q8N6Y2 441 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 EIF1ADQ8N9N8 165 aaKnown RBP2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 RELL2Q8NC24 303 aaPredicted RBP2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 ZNF397Q8NF99 534 aaPredicted RBP2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 OR56B1Q8NGI3 324 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 RLN3Q8WXF3 142 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 GAL3ST1Q99999 423 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 CCDC77Q9BR77 488 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 NFKBIZQ9BYH8 718 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 NMNAT2Q9BZQ4 307 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 TRIM9Q9C026 710 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 CCSER1Q9C0I3 900 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 TMEM231Q9H6L2 316 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 C8orf33Q9H7E9 229 aaPredicted RBP2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 VAT1LQ9HCJ6 419 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 NRN1Q9NPD7 142 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 LHX3Q9UBR4 397 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 CLEC4AQ9UMR7 237 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 ZNF175Q9Y473 711 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 SPACA6W5XKT8 324 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 TNIKQ9UKE5 1360 aa2.94□□□□□ -1.94
LSM1P1-201ENST00000438629 POGZQ7Z3K3 1410 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 NPC1L1Q9UHC9 1359 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 IGHV3OR16-12A0A075B7B8 117 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 TRABD2BA6NFA1 517 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 FAM47DPA6NHR8 397 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 PCP4L1A6NKN8 68 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 RSPH10B2B2RC85 870 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 H0YIV9 168 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 PHF1O43189 567 aaPredicted RBP2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 LRRTM2O43300 516 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 TYROBPO43914 113 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 LRP3O75074 770 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 WBP4O75554 376 aaKnown RBP2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 PDE5AO76074 875 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 ECDO95905 644 aaPredicted RBP2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 S100A9P06702 114 aaKnown RBP2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 RSPH10BP0C881 870 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 CALB2P22676 271 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 CYP2F1P24903 491 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 UCP1P25874 307 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 NF2P35240 595 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 SAA4P35542 130 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 HMGCS2P54868 508 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 NLRP11P59045 1033 aaKnown RBP2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 KRTAP10-12P60413 245 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 HAND2P61296 217 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 BASP1P80723 227 aaKnown RBP2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 SPAG1Q07617 926 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 SNTB2Q13425 540 aaKnown RBP2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 DOC2AQ14183 400 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 BTG3Q14201 252 aaPredicted RBP2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 TMEM41BQ5BJD5 291 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 FBXO48Q5FWF7 155 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 IL23RQ5VWK5 629 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 CLEC2AQ6UVW9 174 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 ATRAIDQ6UW56 229 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 ERICH1Q86X53 443 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 SLC22A18ASQ8N1D0 253 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 RNF148Q8N7C7 305 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 ZNF491Q8N8L2 437 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 OR8K3Q8NH51 312 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 LILRB4Q8NHJ6 448 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 TFB1MQ8WVM0 346 aaKnown RBP2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 SELENOMQ8WWX9 145 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 PHYHIPQ92561 330 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 BIRC7Q96CA5 298 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 ARL5BQ96KC2 179 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 BCL7BQ9BQE9 202 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 NDUFAF3Q9BU61 184 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 RAB33BQ9H082 229 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 TMEM117Q9H0C3 514 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 VCX2Q9H322 139 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 FANCEQ9HB96 536 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 RAB20Q9NX57 234 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 IMPAD1Q9NX62 359 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 BCAP29Q9UHQ4 241 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms