RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 MED11Q9P086 117 aa9.52□□□□□ -0.89
RTN4-211ENST00000438462 C1orf226A1L170 272 aa9.51□□□□□ -0.89
RTN4-211ENST00000438462 OR6C70A6NIJ9 312 aa9.51□□□□□ -0.89
RTN4-211ENST00000438462 ADAMDEC1O15204 470 aa9.51□□□□□ -0.89
RTN4-211ENST00000438462 SCO2O43819 266 aa9.51□□□□□ -0.89
RTN4-211ENST00000438462 KERAO60938 352 aa9.51□□□□□ -0.89
RTN4-211ENST00000438462 IGHV2-5P01817 119 aa9.51□□□□□ -0.89
RTN4-211ENST00000438462 YES1P07947 543 aa9.51□□□□□ -0.89
RTN4-211ENST00000438462 MYZAPP0CAP1 466 aa9.51□□□□□ -0.89
RTN4-211ENST00000438462 PABPC4LP0CB38 370 aaKnown RBP9.51□□□□□ -0.89
RTN4-211ENST00000438462 KRTAP10-11P60412 298 aa9.51□□□□□ -0.89
RTN4-211ENST00000438462 SLMAPQ14BN4 828 aa9.51□□□□□ -0.89
RTN4-211ENST00000438462 AVPI1Q5T686 147 aa9.51□□□□□ -0.89
RTN4-211ENST00000438462 WDR75Q8IWA0 830 aaKnown RBP9.51□□□□□ -0.89
RTN4-211ENST00000438462 CNTN4Q8IWV2 1026 aa9.51□□□□□ -0.89
RTN4-211ENST00000438462 CPNE9Q8IYJ1 553 aa9.51□□□□□ -0.89
RTN4-211ENST00000438462 CDK20Q8IZL9 346 aa9.51□□□□□ -0.89
RTN4-211ENST00000438462 KCNJ9Q92806 393 aa9.51□□□□□ -0.89
RTN4-211ENST00000438462 C1GALT1C1Q96EU7 318 aa9.51□□□□□ -0.89
RTN4-211ENST00000438462 REXO5Q96IC2 774 aaKnown RBP9.51□□□□□ -0.89
RTN4-211ENST00000438462 TMEM185BQ9H7F4 350 aa9.51□□□□□ -0.89
RTN4-211ENST00000438462 CXorf21Q9HAI6 301 aa9.51□□□□□ -0.89
RTN4-211ENST00000438462 STOML1Q9UBI4 398 aa9.51□□□□□ -0.89
RTN4-211ENST00000438462 SEC14L4Q9UDX3 406 aa9.51□□□□□ -0.89
RTN4-211ENST00000438462 HUWE1Q7Z6Z7 4374 aaKnown RBP9.51□□□□□ -0.89
RTN4-211ENST00000438462 A0A0J9YW62 118 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 E9PQ18 207 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 RTCAO00442 366 aaKnown RBP9.5□□□□□ -0.89
RTN4-211ENST00000438462 NDUFB5O43674 189 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 TRAF3IP2O43734 574 aaPredicted RBP9.5□□□□□ -0.89
RTN4-211ENST00000438462 HPXP02790 462 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 TPM2P07951 284 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 ADRA2AP08913 450 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 IGHV4-38-2P0DP08 117 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 IGLL1P15814 213 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 RAB10P61026 200 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 DHX9Q08211 1270 aaKnown RBP9.5□□□□□ -0.89
RTN4-211ENST00000438462 STX5Q13190 355 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 TMEM44Q2T9K0 475 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 C18orf63Q68DL7 685 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 DUPD1Q68J44 220 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 NEPROQ6NW34 567 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 C9orf139Q6ZV77 190 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 RNF144BQ7Z419 303 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 VN1R5Q7Z5H4 357 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 ACOT4Q8N9L9 421 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 Q8NFD4 153 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 TTLQ8NG68 377 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 RDH5Q92781 318 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 TMBIM1Q969X1 311 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 VPS39Q96JC1 886 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 MAP6Q96JE9 813 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 CTTNBP2NLQ9P2B4 639 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 DYRK1BQ9Y463 629 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 TCAF1Q9Y4C2 921 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 AUP1Q9Y679 476 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 PLECQ15149 4684 aaKnown RBP9.5□□□□□ -0.89
RTN4-211ENST00000438462 ALMS1Q8TCU4 4167 aa9.5□□□□□ -0.89
RTN4-211ENST00000438462 A0A1W2PS29 197 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 ACOX3O15254 700 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 IGHV3-9P01782 118 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 SKILP12757 684 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 CDH2P19022 906 aaPredicted RBP9.49□□□□□ -0.89
RTN4-211ENST00000438462 ATP5A1P25705 553 aaKnown RBP9.49□□□□□ -0.89
RTN4-211ENST00000438462 TIA1P31483 386 aaKnown RBP eCLIP9.49□□□□□ -0.891e-6■■□□□ 13.5
RTN4-211ENST00000438462 HPDP32754 393 aaPredicted RBP9.49□□□□□ -0.89
RTN4-211ENST00000438462 GALNSP34059 522 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 FEN1P39748 380 aaKnown RBP9.49□□□□□ -0.89
RTN4-211ENST00000438462 TMEM33P57088 247 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 SESN2P58004 480 aaPredicted RBP9.49□□□□□ -0.89
RTN4-211ENST00000438462 RPL15P61313 204 aaKnown RBP9.49□□□□□ -0.89
RTN4-211ENST00000438462 MVKQ03426 396 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 KLHL30Q0D2K2 578 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 SP140Q13342 867 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 SLC9B1Q4ZJI4 515 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 ESPNLQ6ZVH7 1005 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 LRRC70Q7Z2Q7 622 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 SPATA21Q7Z572 469 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 WDR31Q8NA23 367 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 MLKLQ8NB16 471 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 RNF138Q8WVD3 245 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 ANKRD7Q92527 254 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 TANKQ92844 425 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 ZDHHC16Q969W1 377 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 KCNC2Q96PR1 638 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 F2RL3Q96RI0 385 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 ADOQ96SZ5 270 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 SRXN1Q9BYN0 137 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 BRINP2Q9C0B6 783 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 PTGES2Q9H7Z7 377 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 OXSMQ9NWU1 459 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 GRID1Q9ULK0 1009 aa9.49□□□□□ -0.89
RTN4-211ENST00000438462 WASHC1A8K0Z3 465 aa9.48□□□□□ -0.89
RTN4-211ENST00000438462 GMFGO60234 142 aa9.48□□□□□ -0.89
RTN4-211ENST00000438462 JTBO76095 146 aa9.48□□□□□ -0.89
RTN4-211ENST00000438462 PRKD3O94806 890 aa9.48□□□□□ -0.89
RTN4-211ENST00000438462 METTL18O95568 372 aa9.48□□□□□ -0.89
RTN4-211ENST00000438462 GAS8O95995 478 aa9.48□□□□□ -0.89
RTN4-211ENST00000438462 ADRA1DP25100 572 aa9.48□□□□□ -0.89
RTN4-211ENST00000438462 MSX2P35548 267 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms