RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 RBM45Q8IUH3 476 aaKnown RBP6.28□□□□□ -1.4
CSDE1-205ENST00000438362 OR4K13Q8NH42 304 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 NSMAFQ92636 917 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 NKD1Q969G9 470 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 SGTBQ96EQ0 304 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 DCBLD2Q96PD2 775 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 CNN2Q99439 309 aaKnown RBP6.28□□□□□ -1.4
CSDE1-205ENST00000438362 C1QTNF2Q9BXJ5 285 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 OR51J1Q9H342 316 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 TAAR2Q9P1P5 351 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 PCDHGA3Q9Y5H0 932 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 ALG5Q9Y673 324 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 MAU2Q9Y6X3 613 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 A0A1B0GVI7 797 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 OR52A4PA6NMU1 304 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 RBBP9O75884 186 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 KRT33AO76009 404 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 CSTAP01040 98 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 UQCRC1P31930 480 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 GNALP38405 381 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 CDK3Q00526 305 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF234Q14588 700 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 PUM1Q14671 1186 aaKnown RBP eCLIP6.28□□□□□ -1.47e-7■■□□□ 11.5
CSDE1-205ENST00000438362 CST6Q15828 149 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 ODF4Q2M2E3 257 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 ACSM3Q53FZ2 586 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 SYT14P1Q58G82 188 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 SLC39A5Q6ZMH5 540 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 SDR16C5Q8N3Y7 309 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 FTMTQ8N4E7 242 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 FAM26EQ8N5C1 309 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 DNAJC5GQ8N7S2 189 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 C12orf76Q8N812 135 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-205ENST00000438362 TMIEQ8NEW7 156 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 OR5K2Q8NHB8 316 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 PHOSPHO1Q8TCT1 267 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 BCL7CQ8WUZ0 217 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-205ENST00000438362 SLC25A46Q96AG3 418 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 QRSL1Q9H0R6 528 aaKnown RBP6.28□□□□□ -1.4
CSDE1-205ENST00000438362 GLIPR2Q9H4G4 154 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 EXO5Q9H790 373 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 ELL3Q9HB65 397 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-205ENST00000438362 MRPL15Q9P015 296 aaKnown RBP6.28□□□□□ -1.4
CSDE1-205ENST00000438362 LAMP5Q9UJQ1 280 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 NUBP2Q9Y5Y2 271 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 NINQ8N4C6 2090 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 TRBV5-3A0A0A0MS03 114 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 TRDV1A0A1B0GX56 115 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 HEPACAM2A8MVW5 462 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 TMEM150CB9EJG8 249 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 H3BSH0 61 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 CREBL2O60519 120 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-205ENST00000438362 DPM1O60762 260 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 KCNJ13O60928 360 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 NCR1O76036 304 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 FCER2P06734 321 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 IGFBP1P08833 259 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-205ENST00000438362 CXCR1P25024 350 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 IL12BP29460 328 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 HOXA9P31269 272 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 MLLT3P42568 568 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-205ENST00000438362 HTR3AP46098 478 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 GPR143P51810 404 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 WNT3P56703 355 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 CD300CQ08708 224 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 GPM6BQ13491 265 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 ALG10BQ5I7T1 473 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 TCTN3Q6NUS6 607 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 WDR53Q7Z5U6 358 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-205ENST00000438362 LAS2Q8IYD9 372 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 OR51L1Q8NGJ5 315 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 THAP4Q8WY91 577 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 THRSPQ92748 146 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 SLC35B4Q969S0 331 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 SLC25A36Q96CQ1 311 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 OPALINQ96PE5 141 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 NEDD4LQ96PU5 975 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF559Q9BR84 538 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 BTBD2Q9BX70 525 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 PIGUQ9H490 435 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 MED17Q9NVC6 651 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 CCL27Q9Y4X3 112 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 TRIP12Q14669 1992 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-205ENST00000438362 A6NL46 340 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 SCDO00767 359 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 PPP1R3DO95685 299 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 CRYZL1O95825 349 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 CD3GP09693 182 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF24P17028 368 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 RRAS2P62070 204 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-205ENST00000438362 ASAH1Q13510 395 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 DECR1Q16698 335 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 MEPCEQ7L2J0 689 aaKnown RBP6.28□□□□□ -1.4
CSDE1-205ENST00000438362 TMED4Q7Z7H5 227 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 TMPRSS12Q86WS5 348 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 PLPP6Q8IY26 295 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 CDRT4Q8N9R6 151 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 OR8K3Q8NH51 312 aa6.28□□□□□ -1.4
CSDE1-205ENST00000438362 KCTD12Q96CX2 325 aaKnown RBP6.28□□□□□ -1.4
CSDE1-205ENST00000438362 C16orf58Q96GQ5 468 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms