RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 MRPL2Q5T653 305 aaKnown RBP23.86■■□□□ 1.41
CPNE1-216ENST00000437340 NKAIN2Q5VXU1 208 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 MBOAT2Q6ZWT7 520 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 PELOQ9BRX2 385 aaKnown RBP23.86■■□□□ 1.41
CPNE1-216ENST00000437340 FBXO34Q9NWN3 711 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 KCNE5Q9UJ90 142 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 RPL36Q9Y3U8 105 aaKnown RBP23.86■■□□□ 1.41
CPNE1-216ENST00000437340 GXYLT2A0PJZ3 443 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 GALNSP34059 522 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 STAT5AP42229 794 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 GPR3P46089 330 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 PCYT1AP49585 367 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 MFSD4BQ5TF39 518 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 PLAG1Q6DJT9 500 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 FIGNL1Q6PIW4 674 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 MRGPREQ86SM8 312 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 PLXDC1Q8IUK5 500 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 NKAIN4Q8IVV8 208 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 TCEANCQ8N8B7 351 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 TEX47Q8TBZ9 253 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 TBC1D15Q8TC07 691 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 SPRTNQ9H040 489 aaPredicted RBP23.86■■□□□ 1.41
CPNE1-216ENST00000437340 KRCC1Q9NPI7 259 aaPredicted RBP23.86■■□□□ 1.41
CPNE1-216ENST00000437340 TRAPPC13A5PLN9 417 aa23.85■■□□□ 1.41
CPNE1-216ENST00000437340 CNOT3O75175 753 aaKnown RBP23.85■■□□□ 1.41
CPNE1-216ENST00000437340 GLB1P16278 677 aa23.85■■□□□ 1.41
CPNE1-216ENST00000437340 TGFBR2P37173 567 aa23.85■■□□□ 1.41
CPNE1-216ENST00000437340 EFNB1P98172 346 aa23.85■■□□□ 1.41
CPNE1-216ENST00000437340 NR1D2Q14995 579 aa23.85■■□□□ 1.41
CPNE1-216ENST00000437340 TIGD6Q17RP2 521 aa23.85■■□□□ 1.41
CPNE1-216ENST00000437340 KIF18BQ86Y91 864 aa23.85■■□□□ 1.41
CPNE1-216ENST00000437340 DTWD2Q8NBA8 298 aa23.85■■□□□ 1.41
CPNE1-216ENST00000437340 OR51Q1Q8NH59 317 aa23.85■■□□□ 1.41
CPNE1-216ENST00000437340 VSTM2LQ96N03 204 aa23.85■■□□□ 1.41
CPNE1-216ENST00000437340 TVP23BQ9NYZ1 205 aa23.85■■□□□ 1.41
CPNE1-216ENST00000437340 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.85■■□□□ 1.41
CPNE1-216ENST00000437340 TTC36A6NLP5 189 aa23.84■■□□□ 1.41
CPNE1-216ENST00000437340 PEX12O00623 359 aa23.84■■□□□ 1.41
CPNE1-216ENST00000437340 DUX1O43812 170 aa23.84■■□□□ 1.41
CPNE1-216ENST00000437340 PRAMEF2O60811 474 aa23.84■■□□□ 1.41
CPNE1-216ENST00000437340 ADORA3P0DMS8 318 aa23.84■■□□□ 1.41
CPNE1-216ENST00000437340 CD36P16671 472 aa23.84■■□□□ 1.41
CPNE1-216ENST00000437340 OR1D5P58170 312 aa23.84■■□□□ 1.41
CPNE1-216ENST00000437340 GPLD1P80108 840 aa23.84■■□□□ 1.41
CPNE1-216ENST00000437340 HSD11B2P80365 405 aa23.84■■□□□ 1.41
CPNE1-216ENST00000437340 SERTAD2Q14140 314 aa23.84■■□□□ 1.41
CPNE1-216ENST00000437340 SYT16Q17RD7 645 aa23.84■■□□□ 1.41
CPNE1-216ENST00000437340 MED25Q71SY5 747 aa23.84■■□□□ 1.41
CPNE1-216ENST00000437340 ZNF367Q7RTV3 350 aa23.84■■□□□ 1.41
CPNE1-216ENST00000437340 SLC25A45Q8N413 288 aa23.84■■□□□ 1.41
CPNE1-216ENST00000437340 SH3GL3Q99963 347 aa23.84■■□□□ 1.41
CPNE1-216ENST00000437340 NLGN3Q9NZ94 848 aa23.84■■□□□ 1.41
CPNE1-216ENST00000437340 SEMA5BQ9P283 1151 aa23.84■■□□□ 1.41
CPNE1-216ENST00000437340 TESQ9UGI8 421 aaKnown RBP23.84■■□□□ 1.41
CPNE1-216ENST00000437340 KLHL3Q9UH77 587 aa23.84■■□□□ 1.41
CPNE1-216ENST00000437340 NTNG1Q9Y2I2 539 aa23.84■■□□□ 1.41
CPNE1-216ENST00000437340 A0A1B0GVT2 93 aa23.83■■□□□ 1.41
CPNE1-216ENST00000437340 M0R082 166 aa23.83■■□□□ 1.41
CPNE1-216ENST00000437340 KLF4O43474 513 aa23.83■■□□□ 1.41
CPNE1-216ENST00000437340 NR4A1P22736 598 aa23.83■■□□□ 1.41
CPNE1-216ENST00000437340 CD1CP29017 333 aa23.83■■□□□ 1.41
CPNE1-216ENST00000437340 BNIP3Q12983 259 aa23.83■■□□□ 1.41
CPNE1-216ENST00000437340 FLYWCH1Q4VC44 716 aa23.83■■□□□ 1.41
CPNE1-216ENST00000437340 PMS2CLQ68D20 193 aa23.83■■□□□ 1.41
CPNE1-216ENST00000437340 SLC27A4Q6P1M0 643 aa23.83■■□□□ 1.41
CPNE1-216ENST00000437340 IQCF1Q8N6M8 205 aa23.83■■□□□ 1.41
CPNE1-216ENST00000437340 MVB12AQ96EY5 273 aa23.83■■□□□ 1.41
CPNE1-216ENST00000437340 FAM46AQ96IP4 442 aaKnown RBP23.83■■□□□ 1.41
CPNE1-216ENST00000437340 PRRG3Q9BZD7 231 aa23.83■■□□□ 1.41
CPNE1-216ENST00000437340 C14orf105Q9NVL8 296 aa23.83■■□□□ 1.41
CPNE1-216ENST00000437340 SLC7A7Q9UM01 511 aa23.83■■□□□ 1.41
CPNE1-216ENST00000437340 A0A0C4DFX4 3053 aa23.83■■□□□ 1.4
CPNE1-216ENST00000437340 H3BMH7 237 aa23.83■■□□□ 1.4
CPNE1-216ENST00000437340 CDC123O75794 336 aaPredicted RBP23.83■■□□□ 1.4
CPNE1-216ENST00000437340 DHPSP49366 369 aaPredicted RBP23.83■■□□□ 1.4
CPNE1-216ENST00000437340 BTG2P78543 158 aa23.83■■□□□ 1.4
CPNE1-216ENST00000437340 FUT7Q11130 342 aa23.83■■□□□ 1.4
CPNE1-216ENST00000437340 ERV3-1Q14264 604 aa23.83■■□□□ 1.4
CPNE1-216ENST00000437340 NCF4Q15080 339 aa23.83■■□□□ 1.4
CPNE1-216ENST00000437340 ZSWIM7Q19AV6 140 aa23.83■■□□□ 1.4
CPNE1-216ENST00000437340 ACSM5Q6NUN0 579 aa23.83■■□□□ 1.4
CPNE1-216ENST00000437340 SLC35F3Q8IY50 421 aa23.83■■□□□ 1.4
CPNE1-216ENST00000437340 RNF113BQ8IZP6 322 aaKnown RBP23.83■■□□□ 1.4
CPNE1-216ENST00000437340 PLA2G12AQ9BZM1 189 aa23.83■■□□□ 1.4
CPNE1-216ENST00000437340 DNAJC27Q9NZQ0 273 aa23.83■■□□□ 1.4
CPNE1-216ENST00000437340 CNIH4Q9P003 139 aa23.83■■□□□ 1.4
CPNE1-216ENST00000437340 TMEM184BQ9Y519 407 aaPredicted RBP23.83■■□□□ 1.4
CPNE1-216ENST00000437340 PRKYO43930 277 aa23.82■■□□□ 1.4
CPNE1-216ENST00000437340 DRD5P21918 477 aa23.82■■□□□ 1.4
CPNE1-216ENST00000437340 SSTR4P31391 388 aa23.82■■□□□ 1.4
CPNE1-216ENST00000437340 LIPAP38571 399 aa23.82■■□□□ 1.4
CPNE1-216ENST00000437340 ZNF267Q14586 743 aaPredicted RBP23.82■■□□□ 1.4
CPNE1-216ENST00000437340 RNLSQ5VYX0 342 aa23.82■■□□□ 1.4
CPNE1-216ENST00000437340 LYSMD4Q5XG99 296 aa23.82■■□□□ 1.4
CPNE1-216ENST00000437340 GRAMD2AQ8IUY3 354 aa23.82■■□□□ 1.4
CPNE1-216ENST00000437340 NRMQ8IXM6 262 aa23.82■■□□□ 1.4
CPNE1-216ENST00000437340 TMEM255BQ8WV15 326 aa23.82■■□□□ 1.4
CPNE1-216ENST00000437340 OSTF1Q92882 214 aa23.82■■□□□ 1.4
CPNE1-216ENST00000437340 FGF11Q92914 225 aa23.82■■□□□ 1.4
CPNE1-216ENST00000437340 EGLN3Q9H6Z9 239 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms