RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 LPAR4Q99677 370 aa6.5□□□□□ -1.37
LSM3P3-201ENST00000436601 TREX2Q9BQ50 279 aaPredicted RBP6.5□□□□□ -1.37
LSM3P3-201ENST00000436601 BTBD2Q9BX70 525 aa6.5□□□□□ -1.37
LSM3P3-201ENST00000436601 RSPO3Q9BXY4 272 aaPredicted RBP6.5□□□□□ -1.37
LSM3P3-201ENST00000436601 IFT22Q9H7X7 185 aa6.5□□□□□ -1.37
LSM3P3-201ENST00000436601 BCL2L10Q9HD36 194 aa6.5□□□□□ -1.37
LSM3P3-201ENST00000436601 THSD1Q9NS62 852 aa6.5□□□□□ -1.37
LSM3P3-201ENST00000436601 DCAF13Q9NV06 445 aaKnown RBP6.5□□□□□ -1.37
LSM3P3-201ENST00000436601 FBXO34Q9NWN3 711 aa6.5□□□□□ -1.37
LSM3P3-201ENST00000436601 P2RX2Q9UBL9 471 aa6.5□□□□□ -1.37
LSM3P3-201ENST00000436601 PRODH2Q9UF12 536 aa6.5□□□□□ -1.37
LSM3P3-201ENST00000436601 LIPT1Q9Y234 373 aa6.5□□□□□ -1.37
LSM3P3-201ENST00000436601 NPFFR2Q9Y5X5 522 aa6.5□□□□□ -1.37
LSM3P3-201ENST00000436601 MRPS18BQ9Y676 258 aaKnown RBP6.5□□□□□ -1.37
LSM3P3-201ENST00000436601 ZFHX2Q9C0A1 2572 aaPredicted RBP6.5□□□□□ -1.37
LSM3P3-201ENST00000436601 A0A0G2JPF8 293 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 C2orf92A0A1B0GVN3 265 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 TMEM200CA6NKL6 621 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 TTC36A6NLP5 189 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 OR6C76A6NM76 312 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 HNRNPCL2B2RXH8 293 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 HNRNPCL3B7ZW38 293 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 H0YHG0 523 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 H3BNX3 289 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 M0QX08 132 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 MASP2O00187 686 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 MGRN1O60291 552 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 GMNNO75496 209 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 KRT36O76013 467 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 PRKD3O94806 890 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 SOX30O94993 753 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 KCNK2O95069 426 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 H6PDO95479 791 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 AGR2O95994 175 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 SERPINA1P01009 418 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 IGKV1D-16P01601 117 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 CELA2AP08217 269 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 GUSBP08236 651 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 HNRNPCL4P0DMR1 293 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 LIPCP11150 499 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 LIFP15018 202 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 TRHRP34981 398 aaPredicted RBP6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 PIGAP37287 484 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 CLCN2P51788 898 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 GPR85P60893 370 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 MRPS22P82650 360 aaKnown RBP6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 CHRNEQ04844 493 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 SRSF6Q13247 344 aaKnown RBP6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 PUM1Q14671 1186 aaKnown RBP eCLIP6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 ZNHIT3Q15649 155 aaPredicted RBP6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 NNATQ16517 81 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 GPAT3Q53EU6 434 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 DCST2Q5T1A1 773 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 ATAD3BQ5T9A4 648 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 PRAMEF8Q5VWM4 474 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 PRAMEF7Q5VXH5 474 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 TYW3Q6IPR3 259 aaKnown RBP6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 HSDL2Q6YN16 418 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 C16orf47Q6ZP98 133 aaPredicted RBP6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 CBLL1Q75N03 491 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 NDUFAF7Q7L592 441 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 FAM214BQ7L5A3 538 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 C16orf62Q7Z3J2 963 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 ZAR1Q86SH2 424 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 SPATA24Q86W54 205 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 SLC30A8Q8IWU4 369 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 ADGRG5Q8IZF4 528 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 ARMC10Q8N2F6 343 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 COX18Q8N8Q8 333 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 OR10Q1Q8NGQ4 319 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 ELP5Q8TE02 316 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 SLC26A7Q8TE54 656 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 ADAMTS17Q8TE56 1095 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 FAM162AQ96A26 154 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 NACC2Q96BF6 587 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 ZG16BQ96DA0 208 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 NXPE2Q96DL1 559 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 DUS3LQ96G46 650 aaKnown RBP6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 VMP1Q96GC9 406 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 LRGUKQ96M69 825 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 LMF1Q96S06 567 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 SCNM1Q9BWG6 230 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 TRIM15Q9C019 465 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 WWTR1Q9GZV5 400 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 NXF5Q9H1B4 397 aaKnown RBP6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 SLC38A1Q9H2H9 487 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 LIN28AQ9H9Z2 209 aaKnown RBP6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 ZNF160Q9HCG1 818 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 OLAHQ9NV23 265 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 EXD2Q9NVH0 621 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 P4HTMQ9NXG6 502 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 COPS7AQ9UBW8 275 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 KCND3Q9UK17 655 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 FBXL4Q9UKA2 621 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 ANGPT4Q9Y264 503 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 PCDHGB3Q9Y5G1 929 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 MDC1Q14676 2089 aaKnown RBP6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 DSPPQ9NZW4 1301 aa6.49□□□□□ -1.37
LSM3P3-201ENST00000436601 NSG1A0A0A6YYJ2 146 aa6.48□□□□□ -1.37
LSM3P3-201ENST00000436601 TRBV11-1A0A0K0K1C0 115 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms