RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 TMEM201Q5SNT2 666 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 PODNL1Q6PEZ8 512 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 LINGO2Q7L985 606 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 TMPRSS11BQ86T26 416 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 C12orf45Q8N5I9 185 aaPredicted RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 FBXO15Q8NCQ5 510 aaPredicted RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 OR4K5Q8NGD3 323 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 OR51G2Q8NGK0 314 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 SMAP2Q8WU79 429 aaPredicted RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 FAIM2Q9BWQ8 316 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 TDP1Q9NUW8 608 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 SPG21Q9NZD8 308 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 ZNF282Q9UDV7 671 aaPredicted RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 ANGPT4Q9Y264 503 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 ASB4Q9Y574 426 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 MTX2O75431 263 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 RECKO95980 971 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 SPTBP11277 2137 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 HOXB1P14653 301 aaPredicted RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 SLC6A11P48066 632 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 BEX5Q5H9J7 111 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 PYHIN1Q6K0P9 492 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 CORO6Q6QEF8 472 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 GSG1LQ6UXU4 331 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 RAB11FIP2Q7L804 512 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 SLC25A28Q96A46 364 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 WRAP53Q9BUR4 548 aaKnown RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 GSN-AS1Q9NRJ2 163 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 SLC22A7Q9Y694 548 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 ZC3H12DA2A288 527 aaKnown RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 C5orf51A6NDU8 294 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 ACAA1P09110 424 aaPredicted RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 TYMPP19971 482 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 ACHEP22303 614 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 LIMS1P48059 325 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 HMGA2P52926 109 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 COL9A2Q14055 689 aaPredicted RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 SLC30A6Q6NXT4 461 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 TMEM86AQ8N2M4 240 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 FAM26EQ8N5C1 309 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 MTMR14Q8NCE2 650 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 OR4D11Q8NGI4 311 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 SPSB2Q99619 263 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 XKR8Q9H6D3 395 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 SGK2Q9HBY8 427 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 C1GALT1Q9NS00 363 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 IL17CQ9P0M4 197 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 TINAGQ9UJW2 476 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 PCDHB1Q9Y5F3 818 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 SIRT4Q9Y6E7 314 aaPredicted RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 XIRP1Q702N8 1843 aaKnown RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 MTMR11A4FU01 709 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 HOXA2O43364 376 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 TXNL1O43396 289 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 HLA-DQA2P01906 255 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 CTSEP14091 401 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 CD22P20273 847 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 AOAHP28039 575 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 HOXD9P28356 352 aaPredicted RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 AHRP35869 848 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 SNRPEP62304 92 aaKnown RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 GK2Q14410 553 aaPredicted RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 COL19A1Q14993 1142 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 CHRNA6Q15825 494 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 ZNF671Q8TAW3 534 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 TEX47Q8TBZ9 253 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 CNIH4Q9P003 139 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 ING1Q9UK53 422 aaPredicted RBP7.01□□□□□ -1.29
CPSF6-202ENST00000435070 CORO2BQ9UQ03 480 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 AP1M2Q9Y6Q5 423 aa7.01□□□□□ -1.29
CPSF6-202ENST00000435070 YKT6O15498 198 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 ACP2P11117 423 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 GABRA1P14867 456 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 GDNFP39905 211 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 GUCA2BQ16661 112 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 C2orf76Q3KRA6 126 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 SFXN4Q6P4A7 337 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 CEACAM19Q7Z692 300 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 SLITRK4Q8IW52 837 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 OR5M1Q8NGP8 315 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 OR13C5Q8NGS8 318 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 SPATA5L1Q9BVQ7 753 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 PIPOXQ9P0Z9 390 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 GPN3Q9UHW5 284 aaPredicted RBP7□□□□□ -1.29
CPSF6-202ENST00000435070 MSRAQ9UJ68 235 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 FNDC1Q4ZHG4 1894 aaPredicted RBP7□□□□□ -1.29
CPSF6-202ENST00000435070 CLDN7O95471 211 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 PRMT2P55345 433 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 SEC61A1P61619 476 aaKnown RBP7□□□□□ -1.29
CPSF6-202ENST00000435070 E2F1Q01094 437 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 SLC27A4Q6P1M0 643 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 TTC9BQ8N6N2 239 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 OR52N2Q8NGI0 321 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 CCDC74BQ96LY2 380 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 MIEF1Q9NQG6 463 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 MED11Q9P086 117 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 DSPPQ9NZW4 1301 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 TMEM129A0AVI4 362 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 E7EQ34 232 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 ABCD4O14678 606 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms