RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 DBTP11182 482 aaKnown RBP11.11□□□□□ -0.63
CTCFL-209ENST00000433949 NT5EP21589 574 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 CDH3P22223 829 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 OPRL1P41146 370 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 MED22Q15528 200 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 TMEM44Q2T9K0 475 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 KLHL22Q53GT1 634 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 TRMT12Q53H54 448 aaKnown RBP11.11□□□□□ -0.63
CTCFL-209ENST00000433949 ZNF438Q7Z4V0 828 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 HMGN2P46Q86SG4 172 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 MRGPREQ86SM8 312 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 C19orf47Q8N9M1 422 aaKnown RBP11.11□□□□□ -0.63
CTCFL-209ENST00000433949 WDR36Q8NI36 951 aaKnown RBP11.11□□□□□ -0.63
CTCFL-209ENST00000433949 ADAMTS18Q8TE60 1221 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 RPL3LQ92901 407 aaKnown RBP11.11□□□□□ -0.63
CTCFL-209ENST00000433949 CTHRC1Q96CG8 243 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 HSPBAP1Q96EW2 488 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 DACH2Q96NX9 599 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 MCHR1Q99705 422 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 MND1Q9BWT6 205 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 SLIRPQ9GZT3 109 aaKnown RBP11.11□□□□□ -0.63
CTCFL-209ENST00000433949 MMP27Q9H306 513 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 ERVMER34-1Q9H9K5 563 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 CAPN10Q9HC96 672 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 ADAP2Q9NPF8 381 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 AKIP1Q9NQ31 210 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 SEMA4GQ9NTN9 838 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 TVP23BQ9NYZ1 205 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 NLGN3Q9NZ94 848 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 HYKKA2RU49 373 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 ARHGAP33O14559 1287 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 SLC35E2P0CK97 266 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 RPS4Y1P22090 263 aaKnown RBP11.11□□□□□ -0.63
CTCFL-209ENST00000433949 GADD45AP24522 165 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 FPR3P25089 353 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 STAT5AP42229 794 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 EFNB1P98172 346 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 ZNF91Q05481 1191 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 C1DQ13901 141 aaKnown RBP11.11□□□□□ -0.63
CTCFL-209ENST00000433949 NR1D2Q14995 579 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 DCST2Q5T1A1 773 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 C19orf48Q6RUI8 117 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 PRSS41Q7RTY9 318 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 CLIP4Q8N3C7 705 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 TMCO5AQ8N6Q1 288 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 COX18Q8N8Q8 333 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 PROKR2Q8NFJ6 384 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 CEP76Q8TAP6 659 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 OSTF1Q92882 214 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 PPP1R14BQ96C90 147 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 CTPS2Q9NRF8 586 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 TBCCD1Q9NVR7 557 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 ETAA1Q9NY74 926 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 MAT2BQ9NZL9 334 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 DNAJC27Q9NZQ0 273 aa11.11□□□□□ -0.63
CTCFL-209ENST00000433949 MRPS33Q9Y291 106 aaKnown RBP11.11□□□□□ -0.63
CTCFL-209ENST00000433949 GPR55Q9Y2T6 319 aaPredicted RBP11.11□□□□□ -0.63
CTCFL-209ENST00000433949 KMT2EQ8IZD2 1858 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 A0A1B0GTQ1 180 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 TLX2O43763 284 aaPredicted RBP11.1□□□□□ -0.63
CTCFL-209ENST00000433949 FMO6PO60774 539 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 DNAJB6O75190 326 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 UBXN7O94888 489 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 SCG5P05408 212 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 GUSBP08236 651 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 IGFBP1P08833 259 aaPredicted RBP11.1□□□□□ -0.63
CTCFL-209ENST00000433949 HSMCR30P0CW71 290 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 NID1P14543 1247 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 ST6GAL1P15907 406 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 SOX18P35713 384 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 OMPP47874 163 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 EEF1A1P68104 462 aaKnown RBP11.1□□□□□ -0.63
CTCFL-209ENST00000433949 TCF15Q12870 199 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 TMED1Q13445 227 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 SNAPC1Q16533 368 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.1□□□□□ -0.63
CTCFL-209ENST00000433949 SLC23A3Q6PIS1 610 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 ZNF836Q6ZNA1 936 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 GDPGP1Q6ZNW5 385 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 Q6ZNX1 250 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 WDR53Q7Z5U6 358 aaPredicted RBP11.1□□□□□ -0.63
CTCFL-209ENST00000433949 CYP4Z2PQ8N1L4 340 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 OR6Q1Q8NGQ2 317 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 SLC41A3Q96GZ6 507 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 TSSK6Q9BXA6 273 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 ZFHX2Q9C0A1 2572 aaPredicted RBP11.1□□□□□ -0.63
CTCFL-209ENST00000433949 MUC6Q6W4X9 2439 aa11.1□□□□□ -0.63
CTCFL-209ENST00000433949 LILRA5A6NI73 299 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 KHNYNO15037 678 aaKnown RBP11.09□□□□□ -0.63
CTCFL-209ENST00000433949 FRS3O43559 492 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 PRKYO43930 277 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 KIAA0513O60268 411 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 GIMD1P0DJR0 217 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 EPHA8P29322 1005 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-209ENST00000433949 TRHRP34981 398 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-209ENST00000433949 MAP3K8P41279 467 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 LIMK1P53667 647 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 PPP1CAP62136 330 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 SF3A2Q15428 464 aaKnown RBP11.09□□□□□ -0.63
CTCFL-209ENST00000433949 SPHARQ15513 63 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms