RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 AFF3P51826 1226 aaKnown RBP11.94□□□□□ -0.5
DDX56-204ENST00000431640 SNRPNP63162 240 aaKnown RBP11.94□□□□□ -0.5
DDX56-204ENST00000431640 EEF1A1P68104 462 aaKnown RBP11.94□□□□□ -0.5
DDX56-204ENST00000431640 SHC2P98077 582 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 MGAT2Q10469 447 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 SNAPC1Q16533 368 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 ZSWIM7Q19AV6 140 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 DCST2Q5T1A1 773 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 C19orf48Q6RUI8 117 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 Q6ZNX1 250 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 RNF113BQ8IZP6 322 aaKnown RBP11.94□□□□□ -0.5
DDX56-204ENST00000431640 PROKR2Q8NFJ6 384 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 OR6Q1Q8NGQ2 317 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 TMEM163Q8TC26 289 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 CTHRC1Q96CG8 243 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 HSPBAP1Q96EW2 488 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 DACH2Q96NX9 599 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 MND1Q9BWT6 205 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 TSSK6Q9BXA6 273 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 MRPS18AQ9NVS2 196 aaKnown RBP11.94□□□□□ -0.5
DDX56-204ENST00000431640 MAT2BQ9NZL9 334 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 DOLKQ9UPQ8 538 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 PCDHGA3Q9Y5H0 932 aa11.94□□□□□ -0.5
DDX56-204ENST00000431640 TDRD6O60522 2096 aaKnown RBP11.93□□□□□ -0.5
DDX56-204ENST00000431640 LILRA5A6NI73 299 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 SGK494L7N484 410 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 CHST10O43529 356 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 FMO6PO60774 539 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 ZIC2O95409 532 aaPredicted RBP11.93□□□□□ -0.5
DDX56-204ENST00000431640 HSMCR30P0CW71 290 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 NME1P15531 152 aaKnown RBP11.93□□□□□ -0.5
DDX56-204ENST00000431640 RPS4Y1P22090 263 aaKnown RBP11.93□□□□□ -0.5
DDX56-204ENST00000431640 TRHRP34981 398 aaPredicted RBP11.93□□□□□ -0.5
DDX56-204ENST00000431640 SOX18P35713 384 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 MAP3K8P41279 467 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 OMPP47874 163 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 MLLT10P55197 1068 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 POU6F2P78424 691 aaPredicted RBP11.93□□□□□ -0.5
DDX56-204ENST00000431640 BIKQ13323 160 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 C1DQ13901 141 aaKnown RBP11.93□□□□□ -0.5
DDX56-204ENST00000431640 GPR68Q15743 365 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 PRTGQ2VWP7 1150 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 ACSM5Q6NUN0 579 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 ZNF836Q6ZNA1 936 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 PRSS41Q7RTY9 318 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 GDF7Q7Z4P5 450 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 WDR53Q7Z5U6 358 aaPredicted RBP11.93□□□□□ -0.5
DDX56-204ENST00000431640 C11orf74Q86VG3 221 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 ARL14Q8N4G2 192 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 CLDN22Q8N7P3 220 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 NANOGP1Q8N7R0 232 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 OR5T3Q8NGG3 340 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 GPR151Q8TDV0 419 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 PIGKQ92643 395 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 RPL3LQ92901 407 aaKnown RBP11.93□□□□□ -0.5
DDX56-204ENST00000431640 ANKRD9Q96BM1 317 aaPredicted RBP11.93□□□□□ -0.5
DDX56-204ENST00000431640 FAM60AQ9NP50 221 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 AKIP1Q9NQ31 210 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 CTPS2Q9NRF8 586 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 MED17Q9NVC6 651 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 TBCCD1Q9NVR7 557 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 UCKL1Q9NWZ5 548 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 CHCHD3Q9NX63 227 aaKnown RBP11.93□□□□□ -0.5
DDX56-204ENST00000431640 DNAJC27Q9NZQ0 273 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 DIMT1Q9UNQ2 313 aaKnown RBP11.93□□□□□ -0.5
DDX56-204ENST00000431640 GOLGA4Q13439 2230 aaKnown RBP11.93□□□□□ -0.5
DDX56-204ENST00000431640 WDR87Q6ZQQ6 2873 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 CACNA1EQ15878 2313 aa11.93□□□□□ -0.5
DDX56-204ENST00000431640 TRAPPC13A5PLN9 417 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 SLC9B1P1A6NJY1 282 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 CLDN4O14493 209 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 PRODHO43272 600 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 PRKYO43930 277 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 OR10H2O60403 315 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 PFDN1O60925 122 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 CTNSO60931 367 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 SDC3O75056 442 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 NKX2-2O95096 273 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 RAB36O95755 333 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 HMGN1P05114 100 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 SCG5P05408 212 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 RNH1P13489 461 aaKnown RBP11.92□□□□□ -0.5
DDX56-204ENST00000431640 NID1P14543 1247 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 GABRA3P34903 492 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 ID2Q02363 134 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 ZNF91Q05481 1191 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 RAB40BQ12829 278 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 TMED1Q13445 227 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 FAM53BQ14153 422 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 SPHARQ15513 63 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 ZNHIT3Q15649 155 aaPredicted RBP11.92□□□□□ -0.5
DDX56-204ENST00000431640 ZNF404Q494X3 552 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 SYT14P1Q58G82 188 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 GARNL3Q5VVW2 1013 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 TUBA3EQ6PEY2 450 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 ZNF438Q7Z4V0 828 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 ZNF761Q86XN6 746 aaPredicted RBP11.92□□□□□ -0.5
DDX56-204ENST00000431640 KIF18BQ86Y91 864 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 ZNF595Q8IYB9 648 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 SLC34A3Q8N130 599 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms