RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 Q5PR19 223 aa13.4□□□□□ -0.26
MSH5-208ENST00000429846 PRSS57Q6UWY2 283 aa13.4□□□□□ -0.26
MSH5-208ENST00000429846 C20orf204Q6ZNR8 217 aa13.4□□□□□ -0.26
MSH5-208ENST00000429846 FAM214BQ7L5A3 538 aa13.4□□□□□ -0.26
MSH5-208ENST00000429846 MARCH3Q86UD3 253 aa13.4□□□□□ -0.26
MSH5-208ENST00000429846 P3H2Q8IVL5 708 aa13.4□□□□□ -0.26
MSH5-208ENST00000429846 HOMEZQ8IX15 550 aa13.4□□□□□ -0.26
MSH5-208ENST00000429846 ZFP28Q8NHY6 868 aa13.4□□□□□ -0.26
MSH5-208ENST00000429846 DUSP19Q8WTR2 217 aa13.4□□□□□ -0.26
MSH5-208ENST00000429846 HOXB13Q92826 284 aaPredicted RBP13.4□□□□□ -0.26
MSH5-208ENST00000429846 PIK3IP1Q96FE7 263 aa13.4□□□□□ -0.26
MSH5-208ENST00000429846 RTN4RQ9BZR6 473 aa13.4□□□□□ -0.26
MSH5-208ENST00000429846 FLRT3Q9NZU0 649 aa13.4□□□□□ -0.26
MSH5-208ENST00000429846 TBK1Q9UHD2 729 aa13.4□□□□□ -0.26
MSH5-208ENST00000429846 EMCNQ9ULC0 261 aa13.4□□□□□ -0.26
MSH5-208ENST00000429846 DSCAMO60469 2012 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 A0A087WZY1 265 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 H0YC42 278 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 KIF2AO00139 706 aaPredicted RBP13.39□□□□□ -0.27
MSH5-208ENST00000429846 SIAH2O43255 324 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 HEXAP06865 529 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 NGFRP08138 427 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 UROSP10746 265 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 PRPS2P11908 318 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 PPP3CBP16298 524 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 GABRA3P34903 492 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 RFX3P48380 749 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 TPD52P55327 224 aaPredicted RBP13.39□□□□□ -0.27
MSH5-208ENST00000429846 CLDN20P56880 219 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 HSPB3Q12988 150 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 ACKR1Q16570 336 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 SGCBQ16585 318 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 TMEM44Q2T9K0 475 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 CEP112Q8N8E3 955 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 CDRT4Q8N9R6 151 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 CEP70Q8NHQ1 597 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 CCL19Q99731 98 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 CCT7Q99832 543 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 TXLNGYQ9BZA5 131 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 PPCSQ9HAB8 311 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 FANCFQ9NPI8 374 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 EMC9Q9Y3B6 208 aa13.39□□□□□ -0.27
MSH5-208ENST00000429846 UQCRHLA0A096LP55 91 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 ALG1L2C9J202 215 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 TBX19O60806 448 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 SEC22BO75396 215 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 NKX2-2O95096 273 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 PROCP04070 461 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 NEFHP12036 1026 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 LCN1P31025 176 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 GPC1P35052 558 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 MAP3K8P41279 467 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 CCT5P48643 541 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 KIAA0040Q15053 153 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 CLEC9AQ6UXN8 241 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 RNF165Q6ZSG1 346 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 GGNQ86UU5 652 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 OR5M1Q8NGP8 315 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 OR6K3Q8NGY3 331 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 GPR151Q8TDV0 419 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 ZBTB8AQ96BR9 441 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 ZBED6CLQ96FA7 236 aaPredicted RBP13.38□□□□□ -0.27
MSH5-208ENST00000429846 GMPPAQ96IJ6 420 aaPredicted RBP13.38□□□□□ -0.27
MSH5-208ENST00000429846 COX4I2Q96KJ9 171 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 MARK4Q96L34 752 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 SMR3AQ99954 134 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 ZNF395Q9H8N7 513 aaPredicted RBP13.38□□□□□ -0.27
MSH5-208ENST00000429846 EQTNQ9NQ60 294 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 C1orf109Q9NX04 203 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 MCTS1Q9ULC4 181 aaKnown RBP13.38□□□□□ -0.27
MSH5-208ENST00000429846 CCL27Q9Y4X3 112 aa13.38□□□□□ -0.27
MSH5-208ENST00000429846 C7orf72A4D263 438 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 SLC28A1O00337 649 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 RGS14O43566 566 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 NDUFB5O43674 189 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 PLIN3O60664 434 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 AQP8O94778 261 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 OXSR1O95747 527 aaPredicted RBP13.37□□□□□ -0.27
MSH5-208ENST00000429846 PLGP00747 810 aaPredicted RBP13.37□□□□□ -0.27
MSH5-208ENST00000429846 TBXA2RP21731 343 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 FRKP42685 505 aaPredicted RBP13.37□□□□□ -0.27
MSH5-208ENST00000429846 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.37□□□□□ -0.27
MSH5-208ENST00000429846 GRAMD1BQ3KR37 738 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 SH2D5Q6ZV89 423 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 ZNF551Q7Z340 670 aaPredicted RBP13.37□□□□□ -0.27
MSH5-208ENST00000429846 ZNF550Q7Z398 422 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 MISPQ8IVT2 679 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 WDR75Q8IWA0 830 aaKnown RBP13.37□□□□□ -0.27
MSH5-208ENST00000429846 GTPBP8Q8N3Z3 284 aaPredicted RBP13.37□□□□□ -0.27
MSH5-208ENST00000429846 ZNF610Q8N9Z0 462 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 OR6Y1Q8NGX8 325 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 ACTRT2Q8TDY3 377 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 PIK3R3Q92569 461 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 EGLN2Q96KS0 407 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 MS4A4EQ96PG1 132 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 BDH2Q9BUT1 245 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 PRRG4Q9BZD6 226 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 UBTD1Q9HAC8 227 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 LRTM1Q9HBL6 345 aa13.37□□□□□ -0.27
MSH5-208ENST00000429846 PLSCR4Q9NRQ2 329 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms