RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 B4GALT3O60512 393 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 CREBL2O60519 120 aaPredicted RBP13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 CDC123O75794 336 aaPredicted RBP13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 FGF2P09038 288 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 NUBP1P53384 320 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 SMIM11AP58511 58 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 GBX1Q14549 363 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 TEX30Q5JUR7 227 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 IZUMO1Q8IYV9 350 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 HDDC3Q8N4P3 179 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 PIGMQ9H3S5 423 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 CNOT2Q9NZN8 540 aaKnown RBP13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 SEC14L3Q9UDX4 400 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 ACSL6Q9UKU0 697 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 DTX4Q9Y2E6 619 aa13.6□□□□□ -0.23
SYNGAP1-203ENST00000428982 STC2O76061 302 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 BCKDHAP12694 445 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 CRISP3P54108 245 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 CNTN1Q12860 1018 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 MRPL58Q14197 206 aaKnown RBP13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 FAM109BQ6ICB4 259 aaPredicted RBP13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 PSAPL1Q6NUJ1 521 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 CLEC9AQ6UXN8 241 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 RGL4Q8IZJ4 473 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 TBC1D20Q96BZ9 403 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 PIGQQ9BRB3 760 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 LAMP5Q9UJQ1 280 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 MEIKINA0A087WXM9 373 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 SLC9B1P1A6NJY1 282 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 PIP5K1CO60331 668 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 TRBC1P01850 177 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 PRDX3P30048 256 aaKnown RBP13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 BPIFB3P59826 476 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 SLC30A8Q8IWU4 369 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 HS6ST3Q8IZP7 471 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 ZNF561Q8N587 486 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 MRPL43Q8N983 215 aaKnown RBP13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 TIFAQ96CG3 184 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 C14orf79Q96F83 325 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 CMTM3Q96MX0 182 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 TMED9Q9BVK6 235 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 MED9Q9NWA0 146 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 BTNL2Q9UIR0 455 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 A0A1W2PRQ8 180 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 PMS2P1A4D2B8 440 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 TMEM200CA6NKL6 621 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 H7C0S8 307 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 RAD1O60671 282 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 LRATO95237 230 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 SRPRAP08240 638 aaKnown RBP13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 UGT2B7P16662 529 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 SOAT1P35610 550 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 RBP2P50120 134 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 DGKEP52429 567 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 RBMS2Q15434 407 aaKnown RBP13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 NKG7Q16617 165 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 CXorf57Q6NSI4 855 aaKnown RBP13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 POMZP3Q6PJE2 187 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 OR56B4Q8NH76 319 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 TEX37Q96LM6 180 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 BARHL1Q9BZE3 327 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 OR10A4Q9H209 315 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 TREM2Q9NZC2 230 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 AHSPQ9NZD4 102 aa13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 ZNF282Q9UDV7 671 aaPredicted RBP13.59□□□□□ -0.23
SYNGAP1-203ENST00000428982 OR6C68A6NDL8 312 aa13.58□□□□□ -0.23
SYNGAP1-203ENST00000428982 LEFTY2O00292 366 aa13.58□□□□□ -0.23
SYNGAP1-203ENST00000428982 EGFP01133 1207 aa13.58□□□□□ -0.23
SYNGAP1-203ENST00000428982 ANXA11P50995 505 aaKnown RBP13.58□□□□□ -0.23
SYNGAP1-203ENST00000428982 AP3S2P59780 193 aa13.58□□□□□ -0.23
SYNGAP1-203ENST00000428982 SMAD4Q13485 552 aaKnown RBP13.58□□□□□ -0.23
SYNGAP1-203ENST00000428982 CAMK2DQ13557 499 aa13.58□□□□□ -0.23
SYNGAP1-203ENST00000428982 VMACQ2NL98 169 aa13.58□□□□□ -0.23
SYNGAP1-203ENST00000428982 IFI44LQ53G44 452 aa13.58□□□□□ -0.23
SYNGAP1-203ENST00000428982 NHLRC3Q5JS37 347 aa13.58□□□□□ -0.23
SYNGAP1-203ENST00000428982 SFRP4Q6FHJ7 346 aaPredicted RBP13.58□□□□□ -0.23
SYNGAP1-203ENST00000428982 DLEU7Q6UYE1 221 aa13.58□□□□□ -0.23
SYNGAP1-203ENST00000428982 Q6ZSR9 355 aa13.58□□□□□ -0.23
SYNGAP1-203ENST00000428982 GPR26Q8NDV2 337 aa13.58□□□□□ -0.23
SYNGAP1-203ENST00000428982 ENKD1Q9H0I2 346 aa13.58□□□□□ -0.23
SYNGAP1-203ENST00000428982 ALX4Q9H161 411 aaPredicted RBP13.58□□□□□ -0.23
SYNGAP1-203ENST00000428982 RDH14Q9HBH5 336 aa13.58□□□□□ -0.23
SYNGAP1-203ENST00000428982 SMCO4Q9NRQ5 59 aa13.58□□□□□ -0.23
SYNGAP1-203ENST00000428982 ZNF629Q9UEG4 869 aaPredicted RBP13.58□□□□□ -0.23
SYNGAP1-203ENST00000428982 TLR4O00206 839 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 CASC3O15234 703 aaKnown RBP13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 HLA-DPB1P04440 258 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 ACPPP15309 386 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 PAX6P26367 422 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 GPX4P36969 197 aaPredicted RBP13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 RFTN2Q52LD8 501 aaPredicted RBP13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 SPIN4Q56A73 249 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 GCNT6Q5T4J0 391 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 CDC73Q6P1J9 531 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 LYPD4Q6UWN0 246 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 SERPINA13PQ6UXR4 307 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 VTCN1Q7Z7D3 282 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 UBE2E3Q969T4 207 aa13.58□□□□□ -0.24
SYNGAP1-203ENST00000428982 SLAMF9Q96A28 289 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms