RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 BCL2A1Q16548 175 aa10.85□□□□□ -0.67
TTC3-208ENST00000428693 EXOC3L2Q2M3D2 409 aa10.85□□□□□ -0.67
TTC3-208ENST00000428693 GRAMD1BQ3KR37 738 aa10.85□□□□□ -0.67
TTC3-208ENST00000428693 FIGNL1Q6PIW4 674 aa10.85□□□□□ -0.67
TTC3-208ENST00000428693 CAMKMTQ7Z624 323 aa10.85□□□□□ -0.67
TTC3-208ENST00000428693 FADS6Q8N9I5 356 aa10.85□□□□□ -0.67
TTC3-208ENST00000428693 CEP70Q8NHQ1 597 aa10.85□□□□□ -0.67
TTC3-208ENST00000428693 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.85□□□□□ -0.67
TTC3-208ENST00000428693 FNDC9Q8TBE3 224 aa10.85□□□□□ -0.67
TTC3-208ENST00000428693 C1GALT1C1Q96EU7 318 aa10.85□□□□□ -0.67
TTC3-208ENST00000428693 ZBED6CLQ96FA7 236 aaPredicted RBP10.85□□□□□ -0.67
TTC3-208ENST00000428693 SH3YL1Q96HL8 342 aaPredicted RBP10.85□□□□□ -0.67
TTC3-208ENST00000428693 ZNF845Q96IR2 970 aaPredicted RBP10.85□□□□□ -0.67
TTC3-208ENST00000428693 ALPK1Q96QP1 1244 aa10.85□□□□□ -0.67
TTC3-208ENST00000428693 UCN2Q96RP3 112 aa10.85□□□□□ -0.67
TTC3-208ENST00000428693 SLC39A3Q9BRY0 314 aa10.85□□□□□ -0.67
TTC3-208ENST00000428693 LMF2Q9BU23 707 aaKnown RBP10.85□□□□□ -0.67
TTC3-208ENST00000428693 TMUB1Q9BVT8 246 aa10.85□□□□□ -0.67
TTC3-208ENST00000428693 GATA5Q9BWX5 397 aaPredicted RBP10.85□□□□□ -0.67
TTC3-208ENST00000428693 REEP4Q9H6H4 257 aa10.85□□□□□ -0.67
TTC3-208ENST00000428693 TAS2R7Q9NYW3 318 aa10.85□□□□□ -0.67
TTC3-208ENST00000428693 PCNX3Q9H6A9 2034 aa10.85□□□□□ -0.67
TTC3-208ENST00000428693 VPS13CQ709C8 3753 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 TMEM233B4DJY2 109 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 MSTNO14793 375 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 HCRTR2O43614 444 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 TRIM13O60858 407 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 SPAG7O75391 227 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 ATE1O95260 518 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 IGKV1D-16P01601 117 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 NEFHP12036 1026 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 SDC1P18827 310 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 ZNF41P51814 821 aaPredicted RBP10.84□□□□□ -0.67
TTC3-208ENST00000428693 DEFB113Q30KQ7 82 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 RFTN2Q52LD8 501 aaPredicted RBP10.84□□□□□ -0.67
TTC3-208ENST00000428693 ZNF385BQ569K4 471 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 ANKRD34AQ69YU3 496 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 SH2D5Q6ZV89 423 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 BTLAQ7Z6A9 289 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 OR2T11Q8NH01 316 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 OR2W6PQ8NHA6 318 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 STARD4Q96DR4 205 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 PIK3IP1Q96FE7 263 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 CCT7Q99832 543 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 KLHL4Q9C0H6 718 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 CXXC4Q9H2H0 198 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 PPCSQ9HAB8 311 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 NEUROD4Q9HD90 331 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 STOML1Q9UBI4 398 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 CLEC4AQ9UMR7 237 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 PROCRQ9UNN8 238 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 SNX8Q9Y5X2 465 aa10.84□□□□□ -0.67
TTC3-208ENST00000428693 NF1P21359 2839 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 ZNF469Q96JG9 3925 aaPredicted RBP10.83□□□□□ -0.68
TTC3-208ENST00000428693 LINC01387J3KSC0 135 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 SCDO00767 359 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 PEX11AO75192 247 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 TNFRSF21O75509 655 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 PSMG1O95456 288 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 HRGP04196 525 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 CRHP06850 196 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 CHRNGP07510 517 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 ALOX5P09917 674 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 HPCAL1P37235 193 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 CD79BP40259 229 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 RNF144AP50876 292 aaPredicted RBP10.83□□□□□ -0.68
TTC3-208ENST00000428693 CTBP2P56545 445 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 ADAM8P78325 824 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 PCLAFQ15004 111 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 KIAA0040Q15053 153 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 CCNJQ5T5M9 372 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 ALKBH2Q6NS38 261 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 APOOLQ6UXV4 268 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 Q6ZSR9 355 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 ZNF550Q7Z398 422 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 TDRPQ86YL5 185 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 COX18Q8N8Q8 333 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 CDRT4Q8N9R6 151 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 RNF138Q8WVD3 245 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 TWIST2Q8WVJ9 160 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 C16orf58Q96GQ5 468 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 METTL2AQ96IZ6 378 aaKnown RBP10.83□□□□□ -0.68
TTC3-208ENST00000428693 WFIKKN1Q96NZ8 548 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 MS4A4EQ96PG1 132 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 MECRQ9BV79 373 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 GSX1Q9H4S2 264 aaPredicted RBP10.83□□□□□ -0.68
TTC3-208ENST00000428693 TMEM185BQ9H7F4 350 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 PLEKHF2Q9H8W4 249 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 UBTD1Q9HAC8 227 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 EML4Q9HC35 981 aaKnown RBP10.83□□□□□ -0.68
TTC3-208ENST00000428693 ZNF226Q9NYT6 803 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 GIMAP2Q9UG22 337 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 TRAF6Q9Y4K3 522 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 CCL27Q9Y4X3 112 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 AP4B1Q9Y6B7 739 aa10.83□□□□□ -0.68
TTC3-208ENST00000428693 FLNAP21333 2647 aaKnown RBP10.83□□□□□ -0.68
TTC3-208ENST00000428693 TTC36A6NLP5 189 aa10.82□□□□□ -0.68
TTC3-208ENST00000428693 TMEM114B3SHH9 223 aa10.82□□□□□ -0.68
TTC3-208ENST00000428693 C16orf97H3BN30 126 aa10.82□□□□□ -0.68
TTC3-208ENST00000428693 PIP5K1BO14986 540 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms