RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 OR52P1PQ8NH57 321 aa7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 FAM110BQ8TC76 370 aa7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 WDR60Q8WVS4 1066 aa7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 APOBEC4Q8WW27 367 aaKnown RBP7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 LZICQ8WZA0 190 aa7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 PSMF1Q92530 271 aa7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 TMCO6Q96DC7 493 aa7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 TPD52L3Q96J77 140 aa7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 TBL1XR1Q9BZK7 514 aa7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 HOXD1Q9GZZ0 328 aa7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 MTHFD2LQ9H903 347 aaPredicted RBP7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 UBQLN4Q9NRR5 601 aa7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 HPF1Q9NWY4 346 aa7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 ANKRD10Q9NXR5 420 aa7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 KLRF1Q9NZS2 232 aa7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 FLRT3Q9NZU0 649 aa7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 RPS6KA6Q9UK32 745 aa7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 SAMD4AQ9UPU9 718 aaKnown RBP7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 ZNF443Q9Y2A4 671 aaPredicted RBP7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 GPC6Q9Y625 555 aaPredicted RBP7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 KCNMB2Q9Y691 235 aa7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 MAP1BP46821 2468 aaKnown RBP7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 APC2O95996 2303 aa7.28□□□□□ -1.24
HMGA1P4-201ENST00000428643 A0A087WV48 116 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 PRAMEF25A6NGN4 478 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 AQP12BA6NM10 295 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 NPIPB9F8W1W9 429 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 H3BNH8 94 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 K7ENP7 123 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 M0QX08 132 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 SUV39H1O43463 412 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 GCM2O75603 506 aaPredicted RBP7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 OXSR1O95747 527 aaPredicted RBP7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 CAPNS1P04632 268 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 THBS1P07996 1170 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 GUSBP08236 651 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 NID1P14543 1247 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 IL7RP16871 459 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 RPS4Y1P22090 263 aaKnown RBP7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 PSMA4P25789 261 aaKnown RBP7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 LCN1P31025 176 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 PRKAR1BP31321 381 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 EVI2BP34910 448 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 CYB561P49447 251 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 CLK3P49761 638 aaKnown RBP7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 CRYBA2P53672 197 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 PNLIPRP2P54317 469 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 ATP12AP54707 1039 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 RPP38P78345 283 aaKnown RBP7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 ARG2P78540 354 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 DMTNQ08495 405 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 MFAP5Q13361 173 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 CCNIQ14094 377 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 MAPK14Q16539 360 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 NTRK2Q16620 822 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 ZNF791Q3KP31 576 aaPredicted RBP7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 EIPR1Q53HC9 387 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 DESI1Q6ICB0 168 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 BORAQ6PGQ7 559 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 INO80CQ6PI98 192 aaPredicted RBP7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 LYPD8Q6UX82 237 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 ZNF836Q6ZNA1 936 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 RTL4Q6ZR62 310 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 FKBP9P1Q75LS8 142 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 NUP54Q7Z3B4 507 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 VRK2Q86Y07 508 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 APLFQ8IW19 511 aaPredicted RBP7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 AQP12AQ8IXF9 295 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 GPALPP1Q8IXQ4 340 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 TMCO5AQ8N6Q1 288 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 FAM86B1Q8N7N1 296 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 FDCSPQ8NFU4 85 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 OR10Q1Q8NGQ4 319 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 OR4C3Q8NH37 302 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 RASSF5Q8WWW0 418 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 PROX1Q92786 737 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 PMM1Q92871 262 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 STMN2Q93045 179 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 HGDQ93099 445 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 ZG16BQ96DA0 208 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 HSH2DQ96JZ2 352 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 UTP23Q9BRU9 249 aaKnown RBP7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 SAP130Q9H0E3 1048 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 DENND2DQ9H6A0 471 aaPredicted RBP7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 ARMC7Q9H6L4 198 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 METTL7AQ9H8H3 244 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 GORASP2Q9H8Y8 452 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 DCAF13Q9NV06 445 aaKnown RBP7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 KLHL28Q9NXS3 571 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 STMN3Q9NZ72 180 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 BAG5Q9UL15 447 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 ABCG2Q9UNQ0 655 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 ZNF232Q9UNY5 417 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 AURKCQ9UQB9 309 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 SSUH2Q9Y2M2 353 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 IFT52Q9Y366 437 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 DTNAQ9Y4J8 743 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 PCDHGA10Q9Y5H3 936 aa7.27□□□□□ -1.25
HMGA1P4-201ENST00000428643 DHRS12A0PJE2 317 aa7.26□□□□□ -1.25
HMGA1P4-201ENST00000428643 SERINC4A6NH21 518 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms