RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 NUP43Q8NFH3 380 aa13.97□□□□□ -0.17
CTDSP1-202ENST00000428361 HOXB13Q92826 284 aaPredicted RBP13.97□□□□□ -0.17
CTDSP1-202ENST00000428361 EGLN2Q96KS0 407 aa13.97□□□□□ -0.17
CTDSP1-202ENST00000428361 PPP3R2Q96LZ3 170 aa13.97□□□□□ -0.17
CTDSP1-202ENST00000428361 TSSK3Q96PN8 268 aa13.97□□□□□ -0.17
CTDSP1-202ENST00000428361 GATA5Q9BWX5 397 aaPredicted RBP13.97□□□□□ -0.17
CTDSP1-202ENST00000428361 ATAD3AQ9NVI7 634 aa13.97□□□□□ -0.17
CTDSP1-202ENST00000428361 ELOVL5Q9NYP7 299 aa13.97□□□□□ -0.17
CTDSP1-202ENST00000428361 NTMQ9P121 344 aa13.97□□□□□ -0.17
CTDSP1-202ENST00000428361 PLEKHA6Q9Y2H5 1048 aa13.97□□□□□ -0.17
CTDSP1-202ENST00000428361 FIS1Q9Y3D6 152 aa13.97□□□□□ -0.17
CTDSP1-202ENST00000428361 KIAA1549Q9HCM3 1950 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 TLDC2A0PJX2 215 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 OR2M5A3KFT3 312 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 ALG1L2C9J202 215 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 SEC14L5O43304 696 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 EMC8O43402 210 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 NDUFB5O43674 189 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 TNFSF13O75888 250 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 SMNDC1O75940 238 aaKnown RBP eCLIP13.96□□□□□ -0.173e-7■■■■■ 27.2
CTDSP1-202ENST00000428361 KRT16P08779 473 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 ALOX5P09917 674 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 FRKP42685 505 aaPredicted RBP13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 PRKAG1P54619 331 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 PDE7AQ13946 482 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 MLC1Q15049 377 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 SGCBQ16585 318 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 MARCH3Q86UD3 253 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 TWIST2Q8WVJ9 160 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 SLC9A6Q92581 669 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 ZNF845Q96IR2 970 aaPredicted RBP13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 PRPF18Q99633 342 aaKnown RBP13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 PINK1Q9BXM7 581 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 L2HGDHQ9H9P8 463 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 DNAJC15Q9Y5T4 150 aa13.96□□□□□ -0.17
CTDSP1-202ENST00000428361 MTORP42345 2549 aa13.96□□□□□ -0.18
CTDSP1-202ENST00000428361 MED12LQ86YW9 2145 aa13.96□□□□□ -0.18
CTDSP1-202ENST00000428361 SCDO00767 359 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 LSM1O15116 133 aaKnown RBP13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 AKAP10O43572 662 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 LYPLA1O75608 230 aaPredicted RBP13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 TGM6O95932 706 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 NUDT17P0C025 328 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 LINC00032P0C843 101 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 CD8BP10966 210 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 ME2P23368 584 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 CD79BP40259 229 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 ZNF41P51814 821 aaPredicted RBP13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 PRSS53Q2L4Q9 553 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 DEFB113Q30KQ7 82 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 GRAMD1BQ3KR37 738 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 GALNTL6Q49A17 601 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 RFTN2Q52LD8 501 aaPredicted RBP13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 Q6ZSR9 355 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 WDR75Q8IWA0 830 aaKnown RBP13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 METTL25Q8N6Q8 603 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 COX18Q8N8Q8 333 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 ACTRT2Q8TDY3 377 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 CIDECQ96AQ7 238 aaPredicted RBP13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 ZBTB8AQ96BR9 441 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 PGM2Q96G03 612 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 FAM111AQ96PZ2 611 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 TMUB1Q9BVT8 246 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 PRRG4Q9BZD6 226 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 ROPN1BQ9BZX4 212 aaPredicted RBP13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 RNF122Q9H9V4 155 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 ROPN1Q9HAT0 212 aaPredicted RBP13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 TNFRSF12AQ9NP84 129 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 UBQLN4Q9NRR5 601 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 EMC9Q9Y3B6 208 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 ZNF337Q9Y3M9 751 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 TRAF6Q9Y4K3 522 aa13.95□□□□□ -0.18
CTDSP1-202ENST00000428361 ITPR3Q14573 2671 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 C7orf72A4D263 438 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 HRGP04196 525 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 POU2F1P14859 743 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 FOSL1P15407 271 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 KLK2P20151 261 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 ATP6V1C1P21283 382 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 TBXA2RP21731 343 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 MAP3K8P41279 467 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 KCNJ5P48544 419 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 PON3Q15166 354 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 ATP6AP1LQ52LC2 224 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 PDSS1Q5T2R2 415 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 MFSD12Q6NUT3 480 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 TRABD2AQ86V40 505 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 BANPQ8N9N5 519 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 ZNF527Q8NB42 609 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 PIK3R3Q92569 461 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 JADE3Q92613 823 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 CAVIN3Q969G5 261 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 STARD4Q96DR4 205 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 STACQ99469 402 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 MED18Q9BUE0 208 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 NEUROD4Q9HD90 331 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 DUSP22Q9NRW4 184 aa13.94□□□□□ -0.18
CTDSP1-202ENST00000428361 GLRX2Q9NS18 164 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms