RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 C1orf94Q6P1W5 598 aa24.56■■□□□ 1.52
LDB1-202ENST00000425280 DEPDC4Q8N2C3 294 aa24.56■■□□□ 1.52
LDB1-202ENST00000425280 NODALQ96S42 347 aa24.56■■□□□ 1.52
LDB1-202ENST00000425280 DUSP21Q9H596 190 aa24.56■■□□□ 1.52
LDB1-202ENST00000425280 SCN3BQ9NY72 215 aa24.56■■□□□ 1.52
LDB1-202ENST00000425280 SEC16AO15027 2179 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 OR5F1O95221 314 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 SOX14O95416 240 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 NTN1O95631 604 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 IGFBP1P08833 259 aaPredicted RBP24.55■■□□□ 1.52
LDB1-202ENST00000425280 SLC35A2P78381 396 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 ACY1Q03154 408 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 CD300LDQ6UXZ3 194 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 GDF7Q7Z4P5 450 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 RNF31Q96EP0 1072 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 SLC41A3Q96GZ6 507 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 SENP5Q96HI0 755 aaPredicted RBP24.55■■□□□ 1.52
LDB1-202ENST00000425280 ITPAQ9BY32 194 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 Q9N2J8 555 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 FER1L5A0AVI2 2057 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 FAM20BO75063 409 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 TP53P04637 393 aaPredicted RBP24.55■■□□□ 1.52
LDB1-202ENST00000425280 PRG2P13727 222 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 GABRB1P18505 474 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 RAB39AQ14964 217 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 LPAL2Q16609 132 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 CCDC103Q8IW40 242 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 TMEM151BQ8IW70 566 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 OR7G1Q8NGA0 311 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 IFI44Q8TCB0 444 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 CCDC74BQ96LY2 380 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 GPA33Q99795 319 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 RHNO1Q9BSD3 238 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 ERVK-18Q9QC07 812 aa24.55■■□□□ 1.52
LDB1-202ENST00000425280 A8MUA0 341 aa24.54■■□□□ 1.52
LDB1-202ENST00000425280 AGRPO00253 132 aa24.54■■□□□ 1.52
LDB1-202ENST00000425280 BCAS1O75363 584 aaPredicted RBP24.54■■□□□ 1.52
LDB1-202ENST00000425280 GKN3PP0CG01 181 aa24.54■■□□□ 1.52
LDB1-202ENST00000425280 CKMT1AP12532 417 aa24.54■■□□□ 1.52
LDB1-202ENST00000425280 PLAURQ03405 335 aa24.54■■□□□ 1.52
LDB1-202ENST00000425280 NNATQ16517 81 aa24.54■■□□□ 1.52
LDB1-202ENST00000425280 RANBP3LQ86VV4 465 aaPredicted RBP24.54■■□□□ 1.52
LDB1-202ENST00000425280 NKAIN4Q8IVV8 208 aa24.54■■□□□ 1.52
LDB1-202ENST00000425280 VCX3AQ9NNX9 186 aa24.54■■□□□ 1.52
LDB1-202ENST00000425280 IMPAD1Q9NX62 359 aa24.54■■□□□ 1.52
LDB1-202ENST00000425280 PRODH2Q9UF12 536 aa24.54■■□□□ 1.52
LDB1-202ENST00000425280 SRPK3Q9UPE1 567 aa24.54■■□□□ 1.52
LDB1-202ENST00000425280 M0R129 80 aa24.54■■□□□ 1.52
LDB1-202ENST00000425280 COX10Q12887 443 aa24.54■■□□□ 1.52
LDB1-202ENST00000425280 PDZK1Q5T2W1 519 aa24.54■■□□□ 1.52
LDB1-202ENST00000425280 ZNF321PQ8N8H1 164 aa24.54■■□□□ 1.52
LDB1-202ENST00000425280 ZBTB44Q8NCP5 570 aa24.54■■□□□ 1.52
LDB1-202ENST00000425280 NMD3Q96D46 503 aaKnown RBP24.54■■□□□ 1.52
LDB1-202ENST00000425280 OR6C1Q96RD1 312 aa24.54■■□□□ 1.52
LDB1-202ENST00000425280 GTPBP2Q9BX10 602 aaKnown RBP24.54■■□□□ 1.52
LDB1-202ENST00000425280 SNX5Q9Y5X3 404 aa24.54■■□□□ 1.52
LDB1-202ENST00000425280 TTC36A6NLP5 189 aa24.53■■□□□ 1.52
LDB1-202ENST00000425280 CDC42P60953 191 aa24.53■■□□□ 1.52
LDB1-202ENST00000425280 RHBDD2Q6NTF9 364 aa24.53■■□□□ 1.52
LDB1-202ENST00000425280 ZNF730Q6ZMV8 503 aa24.53■■□□□ 1.52
LDB1-202ENST00000425280 P3H2Q8IVL5 708 aa24.53■■□□□ 1.52
LDB1-202ENST00000425280 ZNF540Q8NDQ6 660 aa24.53■■□□□ 1.52
LDB1-202ENST00000425280 MYCBPQ99417 103 aaPredicted RBP24.53■■□□□ 1.52
LDB1-202ENST00000425280 ARMC7Q9H6L4 198 aa24.53■■□□□ 1.52
LDB1-202ENST00000425280 MKKSQ9NPJ1 570 aaPredicted RBP24.53■■□□□ 1.52
LDB1-202ENST00000425280 TCRBV16S1A1N1A0A5B0 115 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 SP9P0CG40 484 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 HTR2AP28223 471 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 GSTT1P30711 240 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 SLC37A1P57057 533 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 CSNK2BP67870 215 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 DAB2P98082 770 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 ALDH6A1Q02252 535 aaKnown RBP24.52■■□□□ 1.52
LDB1-202ENST00000425280 DECR1Q16698 335 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 PRICKLE2Q7Z3G6 844 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 PRSS58Q8IYP2 241 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 TSC22D3Q99576 134 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 TUBA1CQ9BQE3 449 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 CCDC90BQ9GZT6 254 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 C11orf16Q9NQ32 467 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 CBLCQ9ULV8 474 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 H3BN98 237 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 SYPP08247 313 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 PAX7P23759 505 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 COX15Q7KZN9 410 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 MEX3DQ86XN8 651 aaKnown RBP24.52■■□□□ 1.52
LDB1-202ENST00000425280 BCORP1Q8N888 145 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 ZSCAN1Q8NBB4 408 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 ACOT11Q8WXI4 607 aaPredicted RBP24.52■■□□□ 1.52
LDB1-202ENST00000425280 CLIP3Q96DZ5 547 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 G6PC3Q9BUM1 346 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 SMOC1Q9H4F8 434 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 SLC22A11Q9NSA0 550 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 CTSFQ9UBX1 484 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 RSL24D1Q9UHA3 163 aaKnown RBP24.52■■□□□ 1.52
LDB1-202ENST00000425280 SLC7A7Q9UM01 511 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 OR10H1Q9Y4A9 318 aa24.52■■□□□ 1.52
LDB1-202ENST00000425280 DRD5P21918 477 aa24.51■■□□□ 1.51
LDB1-202ENST00000425280 PCMT1P22061 227 aa24.51■■□□□ 1.51
LDB1-202ENST00000425280 TEKQ02763 1124 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms