RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 MT-CO3P00414 261 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 CST4P01036 141 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 ANXA5P08758 320 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 GSTT2P0CG29 244 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 GSTT2BP0CG30 244 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 NPIPA8P0DM63 369 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 ST6GAL1P15907 406 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 TSPAN8P19075 237 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 FPR3P25089 353 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 PRKAR2BP31323 418 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 STX2P32856 288 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 SFTPDP35247 375 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 HMGCLP35914 325 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 MAGEA2P43356 314 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 RFX3P48380 749 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 PPP3CCP48454 512 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 EFNB2P52799 333 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 ART1P52961 327 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 ATP1B3P54709 279 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 TAS2R38P59533 333 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 GPX6P59796 221 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 TFF2Q03403 129 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 GLO1Q04760 184 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 PKP1Q13835 747 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 GRB7Q14451 532 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 EFNB3Q15768 340 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 MOGQ16653 247 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 KYAT1Q16773 422 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 GOLGA7BQ2TAP0 167 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 EIF2S3LQ2VIR3 472 aaKnown RBP3.34□□□□□ -1.87
SF3B1-205ENST00000424674 SNAI3Q3KNW1 292 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 KLHL22Q53GT1 634 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 C5orf47Q569G3 176 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 RNASE12Q5GAN4 147 aaKnown RBP3.34□□□□□ -1.87
SF3B1-205ENST00000424674 XKR6Q5GH73 641 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 MTX3Q5HYI7 312 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 ZNF691Q5VV52 312 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 NADSYN1Q6IA69 706 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 OR52W1Q6IF63 320 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 ASCL4Q6XD76 172 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 DEF8Q6ZN54 512 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 SLC29A4Q7RTT9 530 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 FAM122BQ7Z309 247 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 MOB3BQ86TA1 216 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 TMEM17Q86X19 198 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 MARCH9Q86YJ5 346 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 GPSM1Q86YR5 675 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 C8orf31Q8N9H6 132 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 OR1F12Q8NHA8 337 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 ESR2Q92731 530 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 CD101Q93033 1021 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 ERGIC1Q969X5 290 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 CCDC127Q96BQ5 260 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 MTBPQ96DY7 904 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 PELI1Q96FA3 418 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 GRAMD2BQ96HH9 432 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 C9orf72Q96LT7 481 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 OPALINQ96PE5 141 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 TSSK3Q96PN8 268 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 CSPG4P5Q96PW8 444 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 AGPAT1Q99943 283 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 THAP7Q9BT49 309 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-205ENST00000424674 SYT11Q9BT88 431 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 GATA5Q9BWX5 397 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-205ENST00000424674 UPF3AQ9H1J1 476 aaKnown RBP3.34□□□□□ -1.87
SF3B1-205ENST00000424674 SLC38A1Q9H2H9 487 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 RIMS4Q9H426 269 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-205ENST00000424674 RNF121Q9H920 327 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 CD209Q9NNX6 404 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 OR2S2Q9NQN1 319 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 DUSP22Q9NRW4 184 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 SERTAD4Q9NUC0 356 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 ZNF701Q9NV72 531 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-205ENST00000424674 C1orf123Q9NWV4 160 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 PAQR5Q9NXK6 330 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-205ENST00000424674 B3GAT1Q9P2W7 334 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 LRWD1Q9UFC0 647 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 SLC7A8Q9UHI5 535 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 FBXL2Q9UKC9 423 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 ADAMTS5Q9UNA0 930 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 NPIPA1Q9UND3 350 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 DIMT1Q9UNQ2 313 aaKnown RBP3.34□□□□□ -1.87
SF3B1-205ENST00000424674 POFUT2Q9Y2G5 429 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 RAP2CQ9Y3L5 183 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 TMED3Q9Y3Q3 217 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 PCDHAC2Q9Y5I4 1007 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 PEX16Q9Y5Y5 336 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 GRIN2DO15399 1336 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 UMODL1Q5DID0 1318 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 PCDH11YQ9BZA8 1340 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 LRPPRCP42704 1394 aaKnown RBP3.34□□□□□ -1.88
SF3B1-205ENST00000424674 A0A1B0GTI1 187 aa3.33□□□□□ -1.88
SF3B1-205ENST00000424674 CLEC18AA5D8T8 446 aa3.33□□□□□ -1.88
SF3B1-205ENST00000424674 FABP12A6NFH5 140 aa3.33□□□□□ -1.88
SF3B1-205ENST00000424674 HSPB6O14558 160 aa3.33□□□□□ -1.88
SF3B1-205ENST00000424674 CYB561D2O14569 222 aa3.33□□□□□ -1.88
SF3B1-205ENST00000424674 AIM2O14862 343 aa3.33□□□□□ -1.88
SF3B1-205ENST00000424674 HAT1O14929 419 aa3.33□□□□□ -1.88
SF3B1-205ENST00000424674 ARPC2O15144 300 aa3.33□□□□□ -1.88
SF3B1-205ENST00000424674 MID1O15344 667 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms