RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 TSPAN2O60636 221 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 ADAM11O75078 769 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 GMNNO75496 209 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 MFN2O95140 757 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 NTN1O95631 604 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 UBTFL6P0CB48 400 aaPredicted RBP12.35□□□□□ -0.43
PRPF39-202ENST00000424478 ANXA11P50995 505 aaKnown RBP12.35□□□□□ -0.43
PRPF39-202ENST00000424478 GPR85P60893 370 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 ZNF311Q5JNZ3 666 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 ERICH5Q6P6B1 374 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 OR5L2Q8NGL0 311 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 SLCO4A1Q96BD0 722 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 POLHQ9Y253 713 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 KCNMB2Q9Y691 235 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 FREM3P0C091 2139 aa12.35□□□□□ -0.43
PRPF39-202ENST00000424478 B4DXG7 233 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 K7EM74 188 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 PRG2P13727 222 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 RYKP34925 604 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 KRT20P35900 424 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 MLF1P58340 268 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 ACTR3P61158 418 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 RBBP4Q09028 425 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 AIMP2Q13155 320 aaKnown RBP12.34□□□□□ -0.43
PRPF39-202ENST00000424478 VEZF1Q14119 521 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 FXNQ16595 210 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 LCN8Q6JVE9 175 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 ZNF836Q6ZNA1 936 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 LRRC74BQ6ZQY2 392 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 SLC34A3Q8N130 599 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 ZNF619Q8N2I2 560 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 SPPL2AQ8TCT8 520 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 RSRC1Q96IZ7 334 aaKnown RBP12.34□□□□□ -0.43
PRPF39-202ENST00000424478 FER1L6-AS2Q96M78 137 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 RNF145Q96MT1 663 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 DCAF13Q9NV06 445 aaKnown RBP12.34□□□□□ -0.43
PRPF39-202ENST00000424478 LIPT1Q9Y234 373 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 GPC6Q9Y625 555 aaPredicted RBP12.34□□□□□ -0.43
PRPF39-202ENST00000424478 A0A0G2JMM0 328 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 A0A1W2PPB8 328 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 A0A1W2PRS3 328 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 KIR3DP1A8MWS1 328 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 J3KTA2 159 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 KIAA0513O60268 411 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 WISP1O95388 367 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 NRG3P56975 720 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 CBLN3Q6UW01 205 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 SLC5A8Q8N695 610 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 ASB15Q8WXK1 588 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 ZCCHC14Q8WYQ9 949 aaKnown RBP12.34□□□□□ -0.43
PRPF39-202ENST00000424478 SIGLEC12Q96PQ1 595 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 RHCGQ9UBD6 479 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 PCDHGB3Q9Y5G1 929 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 OXSR1O95747 527 aaPredicted RBP12.34□□□□□ -0.43
PRPF39-202ENST00000424478 IL33O95760 270 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 CCL3P10147 92 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 RFC3P40938 356 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 CD97P48960 835 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 MRPL2Q5T653 305 aaKnown RBP12.34□□□□□ -0.43
PRPF39-202ENST00000424478 TSPYL5Q86VY4 417 aaPredicted RBP12.34□□□□□ -0.43
PRPF39-202ENST00000424478 GRHL3Q8TE85 626 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 CNOT9Q92600 299 aaKnown RBP12.34□□□□□ -0.43
PRPF39-202ENST00000424478 EXTL1Q92935 676 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 ZNF524Q96C55 264 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 EFHD1Q9BUP0 239 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 LHPPQ9H008 270 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 KLHL1Q9NR64 748 aa12.34□□□□□ -0.43
PRPF39-202ENST00000424478 SPTA1P02549 2419 aa12.33□□□□□ -0.43
PRPF39-202ENST00000424478 DSPPQ9NZW4 1301 aa12.33□□□□□ -0.43
PRPF39-202ENST00000424478 AGAP5A6NIR3 686 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 RRP8O43159 456 aaKnown RBP12.33□□□□□ -0.44
PRPF39-202ENST00000424478 TPST2O60704 377 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 TIPRLO75663 272 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 PPM1BO75688 479 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 WDPCPO95876 746 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 ICAM2P13598 275 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 CD247P20963 164 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 SSR4P51571 173 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 CXADRP78310 365 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 ADGRG5Q8IZF4 528 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 TAGAPQ8N103 731 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 CATSPER1Q8NEC5 780 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 GORASP2Q9H8Y8 452 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 ZNF443Q9Y2A4 671 aaPredicted RBP12.33□□□□□ -0.44
PRPF39-202ENST00000424478 SVILO95425 2214 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 ZFYVE26Q68DK2 2539 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 A0A0G2JPF8 293 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 HNRNPCL2B2RXH8 293 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 HNRNPCL3B7ZW38 293 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 FESP07332 822 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 PABPC4LP0CB38 370 aaKnown RBP12.33□□□□□ -0.44
PRPF39-202ENST00000424478 HNRNPCL4P0DMR1 293 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 HPGDP15428 266 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 VLDLRP98155 873 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 ZNF227Q86WZ6 799 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 TMEM102Q8N9M5 508 aaPredicted RBP12.33□□□□□ -0.44
PRPF39-202ENST00000424478 OR8K3Q8NH51 312 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 BBS10Q8TAM1 723 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 PHOSPHO1Q8TCT1 267 aa12.33□□□□□ -0.44
PRPF39-202ENST00000424478 THAP4Q8WY91 577 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms